RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PABPC5Q96DU9 382 aaKnown RBP15.1■□□□□ 0.01
CCM2-217ENST00000492883 KLHL5Q96PQ7 755 aa15.1■□□□□ 0.01
CCM2-217ENST00000492883 POP1Q99575 1024 aaKnown RBP15.1■□□□□ 0.01
CCM2-217ENST00000492883 MTMR12Q9C0I1 747 aa15.1■□□□□ 0.01
CCM2-217ENST00000492883 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCM2-217ENST00000492883 COG5Q9UP83 839 aa15.1■□□□□ 0.01
CCM2-217ENST00000492883 AGAP1Q9UPQ3 857 aa15.1■□□□□ 0.01
CCM2-217ENST00000492883 RALGAPA2Q2PPJ7 1873 aa15.1■□□□□ 0.01
CCM2-217ENST00000492883 PPP1R3GB7ZBB8 358 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 PPEF2O14830 753 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 SYN3O14994 580 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 LINC01565O15544 149 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 MBD3O95983 291 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 ITGB3P05106 788 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 CD44P16070 742 aaKnown RBP15.09■□□□□ 0.01
CCM2-217ENST00000492883 BMP6P22004 513 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 FGFR3P22607 806 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 PAX3P23760 479 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 CCNE1P24864 410 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 TKTP29401 623 aaKnown RBP15.09■□□□□ 0.01
CCM2-217ENST00000492883 POLR2BP30876 1174 aaKnown RBP15.09■□□□□ 0.01
CCM2-217ENST00000492883 PSMC2P35998 433 aaKnown RBP15.09■□□□□ 0.01
CCM2-217ENST00000492883 NDUFV1P49821 464 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 LILRA4P59901 499 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 RBP5P82980 135 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 CREMQ03060 361 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 LRRC63Q05C16 580 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 ADAM15Q13444 863 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 ZCWPW2Q504Y3 356 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 ANKRD40Q6AI12 368 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 LLGL2Q6P1M3 1020 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 USP37Q86T82 979 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 PPFIBP1Q86W92 1011 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 GPR65Q8IYL9 337 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 C1orf127Q8N9H9 656 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 APPL2Q8NEU8 664 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 EEF2KMTQ96G04 330 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 SUSD3Q96L08 255 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 CGRRF1Q99675 332 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 RXFP1Q9HBX9 757 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 ITGA11Q9UKX5 1188 aa15.09■□□□□ 0.01
CCM2-217ENST00000492883 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.08■□□□□ 0
CCM2-217ENST00000492883 TEX28O15482 410 aa15.08■□□□□ 0
CCM2-217ENST00000492883 AKAP3O75969 853 aa15.08■□□□□ 0
CCM2-217ENST00000492883 ADH1AP07327 375 aa15.08■□□□□ 0
CCM2-217ENST00000492883 SRGAP2BP0DMP2 458 aa15.08■□□□□ 0
CCM2-217ENST00000492883 KRT13P13646 458 aa15.08■□□□□ 0
CCM2-217ENST00000492883 KCNA5P22460 613 aa15.08■□□□□ 0
CCM2-217ENST00000492883 TAF6P49848 677 aa15.08■□□□□ 0
CCM2-217ENST00000492883 PMS1P54277 932 aaKnown RBP15.08■□□□□ 0
CCM2-217ENST00000492883 FKBP3Q00688 224 aaKnown RBP15.08■□□□□ 0
CCM2-217ENST00000492883 PSMD5Q16401 504 aa15.08■□□□□ 0
CCM2-217ENST00000492883 CTC1Q2NKJ3 1217 aa15.08■□□□□ 0
CCM2-217ENST00000492883 ANKS3Q6ZW76 656 aa15.08■□□□□ 0
CCM2-217ENST00000492883 GLYCTKQ8IVS8 523 aa15.08■□□□□ 0
CCM2-217ENST00000492883 FAM186BQ8IYM0 893 aa15.08■□□□□ 0
CCM2-217ENST00000492883 OR5B17Q8NGF7 314 aa15.08■□□□□ 0
CCM2-217ENST00000492883 LNX1Q8TBB1 728 aaPredicted RBP15.08■□□□□ 0
CCM2-217ENST00000492883 PARD3BQ8TEW8 1205 aa15.08■□□□□ 0
CCM2-217ENST00000492883 NELFBQ8WX92 580 aa15.08■□□□□ 0
CCM2-217ENST00000492883 PIK3R5Q8WYR1 880 aa15.08■□□□□ 0
CCM2-217ENST00000492883 FAM84AQ96KN4 292 aa15.08■□□□□ 0
CCM2-217ENST00000492883 ZNF560Q96MR9 790 aa15.08■□□□□ 0
CCM2-217ENST00000492883 UBE2ZQ9H832 354 aaPredicted RBP15.08■□□□□ 0
CCM2-217ENST00000492883 FNIP2Q9P278 1114 aa15.08■□□□□ 0
CCM2-217ENST00000492883 THEGQ9P2T0 379 aa15.08■□□□□ 0
CCM2-217ENST00000492883 PCDHB8Q9UN66 801 aa15.08■□□□□ 0
CCM2-217ENST00000492883 HCFC2Q9Y5Z7 792 aa15.08■□□□□ 0
CCM2-217ENST00000492883 LAMA2P24043 3122 aaKnown RBP15.08■□□□□ 0
CCM2-217ENST00000492883 COL4A4P53420 1690 aaPredicted RBP15.07■□□□□ 0
CCM2-217ENST00000492883 BICDL2A1A5D9 508 aa15.07■□□□□ 0
CCM2-217ENST00000492883 TRIM49BA6NDI0 452 aa15.07■□□□□ 0
CCM2-217ENST00000492883 H7C4K7 107 aa15.07■□□□□ 0
CCM2-217ENST00000492883 MAPK13O15264 365 aa15.07■□□□□ 0
CCM2-217ENST00000492883 SPTLC1O15269 473 aa15.07■□□□□ 0
CCM2-217ENST00000492883 PHACTR2O75167 634 aa15.07■□□□□ 0
CCM2-217ENST00000492883 EPB41P11171 864 aaKnown RBP15.07■□□□□ 0
CCM2-217ENST00000492883 RPL17P18621 184 aaKnown RBP15.07■□□□□ 0
CCM2-217ENST00000492883 PNPLA4P41247 253 aa15.07■□□□□ 0
CCM2-217ENST00000492883 VAMP7P51809 220 aa15.07■□□□□ 0
CCM2-217ENST00000492883 AP3M2P53677 418 aa15.07■□□□□ 0
CCM2-217ENST00000492883 RBM10P98175 930 aaKnown RBP15.07■□□□□ 0
CCM2-217ENST00000492883 SV2CQ496J9 727 aa15.07■□□□□ 0
CCM2-217ENST00000492883 VARS2Q5ST30 1063 aaKnown RBP15.07■□□□□ 0
CCM2-217ENST00000492883 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
CCM2-217ENST00000492883 TRAPPC11Q7Z392 1133 aa15.07■□□□□ 0
CCM2-217ENST00000492883 PALB2Q86YC2 1186 aa15.07■□□□□ 0
CCM2-217ENST00000492883 PLEKHO2Q8TD55 490 aa15.07■□□□□ 0
CCM2-217ENST00000492883 TMC2Q8TDI7 906 aa15.07■□□□□ 0
CCM2-217ENST00000492883 CASP10Q92851 521 aa15.07■□□□□ 0
CCM2-217ENST00000492883 SENP8Q96LD8 212 aa15.07■□□□□ 0
CCM2-217ENST00000492883 CTNND2Q9UQB3 1225 aa15.07■□□□□ 0
CCM2-217ENST00000492883 TIMM13Q9Y5L4 95 aaPredicted RBP15.07■□□□□ 0
CCM2-217ENST00000492883 SZT2Q5T011 3432 aa15.07■□□□□ 0
CCM2-217ENST00000492883 PTPRJQ12913 1337 aa15.07■□□□□ 0
CCM2-217ENST00000492883 NLRC5Q86WI3 1866 aa15.06■□□□□ 0
CCM2-217ENST00000492883 ARHGEF37A1IGU5 675 aa15.06■□□□□ 0
CCM2-217ENST00000492883 SPDYE4A6NLX3 237 aa15.06■□□□□ 0
CCM2-217ENST00000492883 LRRIQ3A6PVS8 624 aaPredicted RBP15.06■□□□□ 0
CCM2-217ENST00000492883 KPNA7A9QM74 516 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms