RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 DHX8Q14562 1220 aaKnown RBP13.56□□□□□ -0.24
COL6A1-205ENST00000492851 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 USP37Q86T82 979 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 ITFG1Q8TB96 612 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 LARP4BQ92615 738 aaKnown RBP13.56□□□□□ -0.24
COL6A1-205ENST00000492851 RAD54LQ92698 747 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 FGF14Q92915 247 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 KIF12Q96FN5 646 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 BORCS6Q96GS4 357 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 ZNF512Q96ME7 567 aaPredicted RBP13.56□□□□□ -0.24
COL6A1-205ENST00000492851 NELL2Q99435 816 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 TBC1D17Q9HA65 648 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 FAM86C1Q9NVL1 165 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 AFF4Q9UHB7 1163 aaKnown RBP13.56□□□□□ -0.24
COL6A1-205ENST00000492851 FBXL5Q9UKA1 691 aa13.56□□□□□ -0.24
COL6A1-205ENST00000492851 MTCL1Q9Y4B5 1905 aaKnown RBP13.55□□□□□ -0.24
COL6A1-205ENST00000492851 A0A0B4J269 797 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 K7ENM7 598 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 M0QZQ0 153 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 ECI2O75521 394 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 OAZ2O95190 189 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 ADRB2P07550 413 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 RHOP08100 348 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 CXCL8P10145 99 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 PLCG1P19174 1290 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 IGFBP6P24592 240 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-205ENST00000492851 GPC5P78333 572 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 GTF2BQ00403 316 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 CACNB1Q02641 598 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-205ENST00000492851 PLD1Q13393 1074 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 ANGPT1Q15389 498 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 NPAS3Q8IXF0 933 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 BEST2Q8NFU1 509 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 NKD2Q969F2 451 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-205ENST00000492851 MSTO1Q9BUK6 570 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 OSBPL6Q9BZF3 934 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 GPR88Q9GZN0 384 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 ST6GALNAC4Q9H4F1 302 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 ZHX3Q9H4I2 956 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 BLOC1S4Q9NUP1 217 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 DERAQ9Y315 318 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 MYO10Q9HD67 2058 aa13.55□□□□□ -0.24
COL6A1-205ENST00000492851 C2orf16Q68DN1 1984 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 VPS37CA5D8V6 355 aaPredicted RBP13.54□□□□□ -0.24
COL6A1-205ENST00000492851 OR6C75A6NL08 312 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 LACTBL1A8MY62 500 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 NCAM2O15394 837 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 MCM6Q14566 821 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 KARSQ15046 597 aaKnown RBP13.54□□□□□ -0.24
COL6A1-205ENST00000492851 POSTNQ15063 836 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 SEZ6Q53EL9 994 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 SLC44A4Q53GD3 710 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 DSTYKQ6XUX3 929 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 PDZD4Q76G19 769 aaPredicted RBP13.54□□□□□ -0.24
COL6A1-205ENST00000492851 ELSPBP1Q96BH3 223 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 HVCN1Q96D96 273 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 INTS4Q96HW7 963 aaKnown RBP13.54□□□□□ -0.24
COL6A1-205ENST00000492851 CORO1BQ9BR76 489 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 ASB7Q9H672 318 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 HCFC1R1Q9NWW0 138 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 SEL1LQ9UBV2 794 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 TUBGCP4Q9UGJ1 667 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
COL6A1-205ENST00000492851 INSL5Q9Y5Q6 135 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 ZDBF2Q9HCK1 2354 aa13.54□□□□□ -0.24
COL6A1-205ENST00000492851 KANSL1LA0AUZ9 987 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 MEFVO15553 781 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-205ENST00000492851 CPB1P15086 417 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 TYMPP19971 482 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 MAGEA9P43362 315 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 AARSP49588 968 aaKnown RBP eCLIP13.53□□□□□ -0.24
COL6A1-205ENST00000492851 ADCY1Q08828 1119 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 MYBPC2Q14324 1141 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 ENOX2Q16206 610 aaKnown RBP13.53□□□□□ -0.24
COL6A1-205ENST00000492851 SPATA1Q5VX52 437 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 RRAGBQ5VZM2 374 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 ARMCX5Q6P1M9 558 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 ZC3H14Q6PJT7 736 aaKnown RBP13.53□□□□□ -0.24
COL6A1-205ENST00000492851 MAP4K3Q8IVH8 894 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 MCRS1Q96EZ8 462 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 RPP25Q9BUL9 199 aaKnown RBP13.53□□□□□ -0.24
COL6A1-205ENST00000492851 BCO2Q9BYV7 579 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 HAPLN2Q9GZV7 340 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 ZSCAN16Q9H4T2 348 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-205ENST00000492851 ZFP14Q9HCL3 533 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 HSFX1Q9UBD0 423 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 CPSF3Q9UKF6 684 aaKnown RBP13.53□□□□□ -0.24
COL6A1-205ENST00000492851 DSEQ9UL01 958 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
COL6A1-205ENST00000492851 MRPS17Q9Y2R5 130 aaKnown RBP13.53□□□□□ -0.24
COL6A1-205ENST00000492851 ODC1P11926 461 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 PDIA4P13667 645 aaKnown RBP13.52□□□□□ -0.25
COL6A1-205ENST00000492851 GAP43P17677 238 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 TNFSF9P41273 254 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 LILRA4P59901 499 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 GPR17Q13304 367 aa13.52□□□□□ -0.25
COL6A1-205ENST00000492851 SNW1Q13573 536 aaKnown RBP13.52□□□□□ -0.25
COL6A1-205ENST00000492851 MLF2Q15773 248 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-205ENST00000492851 ADALQ6DHV7 355 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms