RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 NGRNQ9NPE2 291 aaKnown RBP4.8□□□□□ -1.64
UBR4-215ENST00000492606 STARD5Q9NSY2 213 aa4.8□□□□□ -1.64
UBR4-215ENST00000492606 TCP11L1Q9NUJ3 509 aa4.8□□□□□ -1.64
UBR4-215ENST00000492606 HYPKQ9NX55 129 aa4.8□□□□□ -1.64
UBR4-215ENST00000492606 GMIPQ9P107 970 aa4.8□□□□□ -1.64
UBR4-215ENST00000492606 PCDHB12Q9Y5F1 795 aa4.8□□□□□ -1.64
UBR4-215ENST00000492606 WDR81Q562E7 1941 aa4.8□□□□□ -1.64
UBR4-215ENST00000492606 MEGF8Q7Z7M0 2845 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 GPR75-ASB3A0A0A6YYF3 556 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 VWA5AO00534 786 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 DCLK1O15075 740 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 TIAF1O95411 115 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 CCDC192P0DO97 292 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 ITGB6P18564 788 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 PLCG1P19174 1290 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 FOXO4P98177 505 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 SLBPQ14493 270 aaKnown RBP eCLIP4.79□□□□□ -1.64
UBR4-215ENST00000492606 NKG7Q16617 165 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 KIAA1614Q5VZ46 1190 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 C6orf15Q6UXA7 325 aaPredicted RBP4.79□□□□□ -1.64
UBR4-215ENST00000492606 CXXC5Q7LFL8 322 aaKnown RBP4.79□□□□□ -1.64
UBR4-215ENST00000492606 NLRC3Q7RTR2 1065 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 MCATQ8IVS2 390 aaKnown RBP4.79□□□□□ -1.64
UBR4-215ENST00000492606 THNSL1Q8IYQ7 743 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 SPEM1Q8N4L4 309 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 SMG8Q8ND04 991 aaKnown RBP4.79□□□□□ -1.64
UBR4-215ENST00000492606 OR6J1Q8NGC5 347 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 ZNF384Q8TF68 577 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 LINC01599Q8WXQ3 324 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 COPS5Q92905 334 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 ELMO3Q96BJ8 720 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 IER2Q9BTL4 223 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 WDR6Q9NNW5 1121 aaKnown RBP4.79□□□□□ -1.64
UBR4-215ENST00000492606 HEBP1Q9NRV9 189 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 ADAM30Q9UKF2 790 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 MAPK8IP1Q9UQF2 711 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 LZTS1Q9Y250 596 aa4.79□□□□□ -1.64
UBR4-215ENST00000492606 THADAQ6YHU6 1953 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 CNTNAP5Q8WYK1 1306 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 LCTP09848 1927 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 DCHS2Q6V1P9 2916 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 PRAMEF27A3QJZ7 478 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 VPS37CA5D8V6 355 aaPredicted RBP4.78□□□□□ -1.64
UBR4-215ENST00000492606 KIAA1324LA8MWY0 1029 aaPredicted RBP4.78□□□□□ -1.64
UBR4-215ENST00000492606 FAM229AH3BQW9 127 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 PLK4O00444 970 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 PDPK1O15530 556 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 SH3BP5O60239 455 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 KPNA6O60684 536 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 WFS1O76024 890 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 PGRP06401 933 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 DRD2P14416 443 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 AMPD1P23109 780 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 POLR2BP30876 1174 aaKnown RBP4.78□□□□□ -1.64
UBR4-215ENST00000492606 HOXA6P31267 233 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 ID3Q02535 119 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 SQSTM1Q13501 440 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 ARSHQ5FYA8 562 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 HIST2H2BDQ6DRA6 164 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 TREML4Q6UXN2 200 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 SPATC1Q76KD6 591 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.78□□□□□ -1.64
UBR4-215ENST00000492606 RTN4RL1Q86UN2 441 aaPredicted RBP4.78□□□□□ -1.64
UBR4-215ENST00000492606 CABP7Q86V35 215 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 FOXP4Q8IVH2 680 aaPredicted RBP4.78□□□□□ -1.64
UBR4-215ENST00000492606 SLFN12Q8IYM2 578 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 SPICE1Q8N0Z3 855 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 COLGALT1Q8NBJ5 622 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 APBB2Q92870 758 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 SFXN1Q9H9B4 322 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 DKK3Q9UBP4 350 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 VPS13CQ709C8 3753 aa4.78□□□□□ -1.64
UBR4-215ENST00000492606 NAV1Q8NEY1 1877 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 CLUHO75153 1309 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 FANCGO15287 622 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 UBOX5O94941 541 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 SLFN14P0C7P3 912 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 CHRNB1P11230 501 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 ADH5P11766 374 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 BMP3P12645 472 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 ENGP17813 658 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 HSD3B2P26439 372 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 COPB2P35606 906 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 SOX4Q06945 474 aaPredicted RBP4.77□□□□□ -1.65
UBR4-215ENST00000492606 G3BP1Q13283 466 aaKnown RBP eCLIP4.77□□□□□ -1.65
UBR4-215ENST00000492606 TESK1Q15569 626 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 PPP2R5EQ16537 467 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 FXNQ16595 210 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 DUOXA2Q1HG44 320 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 Q6ZS52 159 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 SERINC5Q86VE9 423 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 PPFIBP1Q86W92 1011 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 MRPL41Q8IXM3 137 aaKnown RBP4.77□□□□□ -1.65
UBR4-215ENST00000492606 ANKRD35Q8N283 1001 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 C2CD4AQ8NCU7 369 aaPredicted RBP4.77□□□□□ -1.65
UBR4-215ENST00000492606 RNF214Q8ND24 703 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 AUTS2Q8WXX7 1259 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 ALG1Q9BT22 464 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 WDR11Q9BZH6 1224 aa4.77□□□□□ -1.65
UBR4-215ENST00000492606 FSCN3Q9NQT6 498 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms