RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CLIC2O15247 247 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 EXTL3O43909 919 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 GADD45BO75293 160 aaPredicted RBP7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 RFPL2O75678 378 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 C1RP00736 705 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 RPN1P04843 607 aaKnown RBP7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 ADH1AP07327 375 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 ELAVL2Q12926 359 aaKnown RBP7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 RAB33AQ14088 237 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 TMEM132DQ14C87 1099 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 PSMD5Q16401 504 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 RARS2Q5T160 578 aaKnown RBP7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 C9orf57Q5W0N0 161 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 TMC5Q6UXY8 1006 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 CBWD2Q8IUF1 395 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 GLYCTKQ8IVS8 523 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 BRSK2Q8IWQ3 736 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 ADHFE1Q8IWW8 467 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 NELFCDQ8IXH7 590 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 TMEM87AQ8NBN3 555 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 ZNF707Q96C28 371 aaPredicted RBP7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 BORCS6Q96GS4 357 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 SUSD3Q96L08 255 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 AGPAT3Q9NRZ7 376 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 HSPBP1Q9NZL4 362 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 MTRRQ9UBK8 725 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 PRKAG3Q9UGI9 489 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 C2CD2Q9Y426 696 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 BACE2Q9Y5Z0 518 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 MUC6Q6W4X9 2439 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 TRIOO75962 3097 aa7.8□□□□□ -1.16
PDLIM1-204ENST00000492511 LOC730098B7Z3J9 87 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 SYN3O14994 580 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 TRAPPC3O43617 180 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 RHOBTB3O94955 611 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 IL18RAPO95256 599 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 LDHAP00338 332 aaKnown RBP7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 GLUD1P00367 558 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 MYL1P05976 194 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 SRGAP2BP0DMP2 458 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 ALADP13716 330 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 OR1D2P34982 312 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 LILRA4P59901 499 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 ITIH3Q06033 890 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 PSMD2Q13200 908 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 CBX2Q14781 532 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 KNOP1Q1ED39 458 aaKnown RBP7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 VARS2Q5ST30 1063 aaKnown RBP7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 ARMCX5Q6P1M9 558 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 STXBP4Q6ZWJ1 553 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 GPR149Q86SP6 731 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 C12orf56Q8IXR9 622 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 GJD3Q8N144 294 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 GPD1LQ8N335 351 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 KREMEN2Q8NCW0 462 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 BEST2Q8NFU1 509 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 CMASQ8NFW8 434 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 HDAC7Q8WUI4 952 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 PHF7Q9BWX1 381 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 KCTD10Q9H3F6 313 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 POMKQ9H5K3 350 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 EPHX3Q9H6B9 360 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 PDE11AQ9HCR9 933 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 MAN1C1Q9NR34 630 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 DZANK1Q9NVP4 752 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 DMAC2Q9NW81 257 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 DPP3Q9NY33 737 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 RBAKQ9NYW8 714 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 PCDHB8Q9UN66 801 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 FAM50BQ9Y247 325 aa7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 TIMM13Q9Y5L4 95 aaPredicted RBP7.79□□□□□ -1.16
PDLIM1-204ENST00000492511 UBE4BO95155 1302 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 PTPRJQ12913 1337 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 TDRD15B5MCY1 1934 aaKnown RBP7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 BRWD1Q9NSI6 2320 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 CCDC195A0A1B0GUA6 201 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 WDR27A2RRH5 827 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 ZNF233A6NK53 670 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 PRR33A8MZF0 331 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 KIAA0391O15091 583 aaKnown RBP7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 XPOTO43592 962 aaKnown RBP7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 ABLIM3O94929 683 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 OAZ2O95190 189 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 VNN2O95498 520 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 SSTR3P32745 418 aaPredicted RBP7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 MCM4P33991 863 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 SNRPFP62306 86 aaKnown RBP7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 CREMQ03060 361 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 PNOCQ13519 176 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 KCNB1Q14721 858 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 LMBRD2Q68DH5 695 aaPredicted RBP7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 SLC8B1Q6J4K2 584 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 PDXDC1Q6P996 788 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 ANKS3Q6ZW76 656 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 NT5DC4Q86YG4 428 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 C1orf127Q8N9H9 656 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 RDH13Q8NBN7 331 aa7.78□□□□□ -1.16
PDLIM1-204ENST00000492511 OR5B17Q8NGF7 314 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms