RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 PTPN2P17706 415 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 CCR2P41597 374 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 NRLP54845 237 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 ROR1Q01973 937 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 SCRN1Q12765 414 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 GAS6Q14393 721 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 UPP1Q16831 310 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 PPM1JQ5JR12 505 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 MCTP1Q6DN14 999 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 SLC8B1Q6J4K2 584 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 CPLX2Q6PUV4 134 aaKnown RBP14.41□□□□□ -0.1
HDAC3-213ENST00000492506 MAEAQ7L5Y9 396 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 ZNF461Q8TAF7 563 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 NETO1Q8TDF5 533 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 IER2Q9BTL4 223 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 TTC12Q9H892 705 aaPredicted RBP14.41□□□□□ -0.1
HDAC3-213ENST00000492506 ZNF334Q9HCZ1 680 aaPredicted RBP14.41□□□□□ -0.1
HDAC3-213ENST00000492506 TRPV5Q9NQA5 729 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 KIF26AQ9ULI4 1882 aaPredicted RBP14.41□□□□□ -0.1
HDAC3-213ENST00000492506 CEP295Q9C0D2 2601 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 STK36Q9NRP7 1315 aa14.41□□□□□ -0.1
HDAC3-213ENST00000492506 SDK1Q7Z5N4 2213 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.4□□□□□ -0.1
HDAC3-213ENST00000492506 WDR27A2RRH5 827 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 WNT7AO00755 349 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 LRP3O75074 770 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 MICAL2O94851 1124 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 RETP07949 1114 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 CHRNB1P11230 501 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 BRCC3P46736 316 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 NR5A1Q13285 461 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 PRPF4BQ13523 1007 aaKnown RBP14.4□□□□□ -0.1
HDAC3-213ENST00000492506 GLRA4Q5JXX5 417 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 VITQ6UXI7 678 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 ANKS3Q6ZW76 656 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 ZSWIM3Q96MP5 696 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 ZNF830Q96NB3 372 aaPredicted RBP14.4□□□□□ -0.1
HDAC3-213ENST00000492506 ASB16Q96NS5 453 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 TRMT61BQ9BVS5 477 aaKnown RBP14.4□□□□□ -0.1
HDAC3-213ENST00000492506 BRD9Q9H8M2 597 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 LMAN1LQ9HAT1 526 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 GOLGA2P5Q9HBQ8 144 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 ZFP14Q9HCL3 533 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 SEMA4GQ9NTN9 838 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 GDAQ9Y2T3 454 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 CYP46A1Q9Y6A2 500 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 MORC2Q9Y6X9 1032 aaPredicted RBP14.4□□□□□ -0.1
HDAC3-213ENST00000492506 NCANO14594 1321 aa14.4□□□□□ -0.1
HDAC3-213ENST00000492506 ARNTLO00327 626 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 ACKR2O00590 384 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 HRO43593 1189 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 MOSPD3O75425 235 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 SEC24AO95486 1093 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 CCR3P51677 355 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 SATB1Q01826 763 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 SOX4Q06945 474 aaPredicted RBP14.39□□□□□ -0.11
HDAC3-213ENST00000492506 DMWDQ09019 674 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 CALCRLQ16602 461 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 MAPK6Q16659 721 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 ZBTB8OSQ8IWT0 167 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 TCEAL8Q8IYN2 117 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 MCPH1Q8NEM0 835 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 FAM3CQ92520 227 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 IRF7Q92985 503 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 CCDC43Q96MW1 224 aaKnown RBP14.39□□□□□ -0.11
HDAC3-213ENST00000492506 MTMR9Q96QG7 549 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 CORO1BQ9BR76 489 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 TM6SF1Q9BZW5 370 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 USP25Q9UHP3 1055 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 RAB23Q9ULC3 237 aa14.39□□□□□ -0.11
HDAC3-213ENST00000492506 EML5Q05BV3 1969 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 ZZEF1O43149 2961 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 ASPMQ8IZT6 3477 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 GDF9O60383 454 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 CTDNEP1O95476 244 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 LRG1P02750 347 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 PRKCBP05771 671 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 ATF2P15336 505 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 PSMC3P17980 439 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 BRD2P25440 801 aaKnown RBP14.38□□□□□ -0.11
HDAC3-213ENST00000492506 GDI1P31150 447 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 MRPL58Q14197 206 aaKnown RBP14.38□□□□□ -0.11
HDAC3-213ENST00000492506 CSRP2Q16527 193 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 WDR44Q5JSH3 913 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 PRR23CQ6ZRP0 262 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 PRR23BQ6ZRT6 265 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 CATSPER3Q86XQ3 398 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 KRT222Q8N1A0 295 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 UROC1Q96N76 676 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 C2orf40Q9H1Z8 148 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 PIAS3Q9Y6X2 628 aa14.38□□□□□ -0.11
HDAC3-213ENST00000492506 NUP210Q8TEM1 1887 aaPredicted RBP14.38□□□□□ -0.11
HDAC3-213ENST00000492506 SMIM28A0A1B0GU29 152 aa14.37□□□□□ -0.11
HDAC3-213ENST00000492506 K7ESF4 209 aa14.37□□□□□ -0.11
HDAC3-213ENST00000492506 PRRG1O14668 218 aa14.37□□□□□ -0.11
HDAC3-213ENST00000492506 TRAPPC3O43617 180 aa14.37□□□□□ -0.11
HDAC3-213ENST00000492506 CDKL5O76039 1030 aa14.37□□□□□ -0.11
HDAC3-213ENST00000492506 REC8O95072 547 aa14.37□□□□□ -0.11
HDAC3-213ENST00000492506 FDPSP14324 419 aaKnown RBP14.37□□□□□ -0.11
HDAC3-213ENST00000492506 XBP1P17861 261 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms