RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 CASP1P29466 404 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 PTPN5P54829 565 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 WNT7BP56706 349 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 NTHL1P78549 312 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 JADE1Q6IE81 842 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 CRELD2Q6UXH1 353 aaPredicted RBP12.82□□□□□ -0.36
MDC1-207ENST00000492462 DHX58Q96C10 678 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 SUSD3Q96L08 255 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 MFSD14AQ96MC6 490 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 MYADMQ96S97 322 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 PRKD2Q9BZL6 878 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 PIDD1Q9HB75 910 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 PANK4Q9NVE7 773 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 ZDHHC7Q9NXF8 308 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 SEL1LQ9UBV2 794 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 DPP7Q9UHL4 492 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 UBQLN1Q9UMX0 589 aaKnown RBP12.82□□□□□ -0.36
MDC1-207ENST00000492462 PCDHA7Q9UN72 937 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 TIMM13Q9Y5L4 95 aaPredicted RBP12.82□□□□□ -0.36
MDC1-207ENST00000492462 BACE2Q9Y5Z0 518 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 CLUHO75153 1309 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 TCHHQ07283 1943 aa12.82□□□□□ -0.36
MDC1-207ENST00000492462 SYN3O14994 580 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 CCL16O15467 120 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 PRPF6O94906 941 aaKnown RBP12.81□□□□□ -0.36
MDC1-207ENST00000492462 GCNT3O95395 438 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 LRPAP1P30533 357 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 MCM4P33991 863 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 ARPP19P56211 112 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 ROR1Q01973 937 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 MRPL58Q14197 206 aaKnown RBP12.81□□□□□ -0.36
MDC1-207ENST00000492462 L1TD1Q5T7N2 865 aaKnown RBP12.81□□□□□ -0.36
MDC1-207ENST00000492462 LIN9Q5TKA1 542 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 PDXDC1Q6P996 788 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 ELMSAN1Q6PJG2 1045 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 ANKS3Q6ZW76 656 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 OTOP3Q7RTS5 596 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 ST13P5Q8NFI4 369 aaPredicted RBP12.81□□□□□ -0.36
MDC1-207ENST00000492462 SLC7A14Q8TBB6 771 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 HVCN1Q96D96 273 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 ASIC4Q96FT7 647 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 FAM84AQ96KN4 292 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 RHOBTB2Q9BYZ6 727 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 OLFML3Q9NRN5 406 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 KBTBD4Q9NVX7 518 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 FBXL5Q9UKA1 691 aa12.81□□□□□ -0.36
MDC1-207ENST00000492462 AGO2Q9UKV8 859 aaKnown RBP12.81□□□□□ -0.36
MDC1-207ENST00000492462 RIF1Q5UIP0 2472 aaKnown RBP12.81□□□□□ -0.36
MDC1-207ENST00000492462 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.8□□□□□ -0.36
MDC1-207ENST00000492462 WDR27A2RRH5 827 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 SPTLC1O15269 473 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 PDGFBP01127 241 aaPredicted RBP12.8□□□□□ -0.36
MDC1-207ENST00000492462 CYP3A5P20815 502 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 GBP2P32456 591 aaPredicted RBP12.8□□□□□ -0.36
MDC1-207ENST00000492462 ME1P48163 572 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 SIGLEC14Q08ET2 396 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 KYAT1Q16773 422 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 PPM1LQ5SGD2 360 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 SPATA1Q5VX52 437 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 SLFN12LQ6IEE8 588 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 SLC8B1Q6J4K2 584 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 CYP26C1Q6V0L0 522 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 GRASPQ7Z6J2 395 aaPredicted RBP12.8□□□□□ -0.36
MDC1-207ENST00000492462 KCNG4Q8TDN1 519 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 RSAD2Q8WXG1 361 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 POMGNT1Q8WZA1 660 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 ACSF2Q96CM8 615 aaPredicted RBP12.8□□□□□ -0.36
MDC1-207ENST00000492462 SAAL1Q96ER3 474 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 ACCSQ96QU6 501 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 TRIM9Q9C026 710 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 TNMDQ9H2S6 317 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 HCFC1R1Q9NWW0 138 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 RCOR1Q9UKL0 485 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 POLIQ9UNA4 740 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 SORCS3Q9UPU3 1222 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 CACNA1HO95180 2353 aa12.8□□□□□ -0.36
MDC1-207ENST00000492462 TSC2P49815 1807 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 GOLGA8IPA6NC78 632 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 GOLGA8JA6NMD2 632 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 M0QZQ0 153 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 POLR2DO15514 142 aaKnown RBP12.79□□□□□ -0.36
MDC1-207ENST00000492462 ABLIM3O94929 683 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 SEC24AO95486 1093 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 PDIA4P13667 645 aaKnown RBP12.79□□□□□ -0.36
MDC1-207ENST00000492462 ABCD1P33897 745 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 HOXD13P35453 343 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
MDC1-207ENST00000492462 TMEM132DQ14C87 1099 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 CTXN3Q4LDR2 81 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 IER5LQ5T953 404 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 RESP18Q5W5W9 173 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 SCARA3Q6AZY7 606 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 GET4Q7L5D6 327 aaPredicted RBP12.79□□□□□ -0.36
MDC1-207ENST00000492462 CCDC65Q8IXS2 484 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 IQUBQ8NA54 791 aa12.79□□□□□ -0.36
MDC1-207ENST00000492462 PBXIP1Q96AQ6 731 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms