RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 AJAP1Q9UKB5 411 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 CFAP20Q9Y6A4 193 aaKnown RBP3.76□□□□□ -1.81
HMGB1P30-201ENST00000492455 NT5C1B-RDH14C9J2C7 533 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 KIF3BO15066 747 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 ERC2O15083 957 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 TRIM24O15164 1050 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 TUSC2O75896 110 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 UBXN7O94888 489 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 GASTP01350 101 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 U2AF1L5P0DN76 240 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 NR4A1P22736 598 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 U2AF1Q01081 240 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 TLE1Q04724 770 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 MRPL49Q13405 166 aaKnown RBP3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 GPR162Q16538 588 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 DCAF17Q5H9S7 520 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 SWSAP1Q6NVH7 229 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 CHST15Q7LFX5 561 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 DGKHQ86XP1 1220 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 BOLLQ8N9W6 283 aaKnown RBP3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 MDGA1Q8NFP4 955 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 SLC35B2Q8TB61 432 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 CCHCR1Q8TD31 782 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 SCARB1Q8WTV0 552 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 STON2Q8WXE9 905 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 C1GALT1C1Q96EU7 318 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 CGRRF1Q99675 332 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 SLC29A3Q9BZD2 475 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 SLC52A1Q9NWF4 448 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 GEMIN8Q9NWZ8 242 aaKnown RBP3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 SLC23A1Q9UHI7 598 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 EIF2B4Q9UI10 523 aaKnown RBP3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 ACTL7AQ9Y615 435 aa3.75□□□□□ -1.81
HMGB1P30-201ENST00000492455 MYBBP1AQ9BQG0 1328 aaKnown RBP3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 GOLGA6CA6NDK9 693 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 GOLGA6BA6NDN3 693 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 NRP1O14786 923 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 PRC1O43663 620 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 CTNND1O60716 968 aaKnown RBP3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 DTNBO60941 627 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 GOLGA6DP0CG33 693 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 DDCP20711 480 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 CXCR5P32302 372 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 ZEB1P37275 1124 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 ALDH1A3P47895 512 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 GZMKP49863 264 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 HK3P52790 923 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 ZNF280AP59817 542 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 SP140Q13342 867 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 ARHGAP29Q52LW3 1261 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 GJC2Q5T442 439 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 ANKS6Q68DC2 871 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 NAIF1Q69YI7 327 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 NOL8Q76FK4 1167 aaKnown RBP3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 DENND1CQ8IV53 801 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 CASKIN2Q8WXE0 1202 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 ST8SIA2Q92186 375 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 RGMAQ96B86 450 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 MYEOVQ96EZ4 313 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 IL17RAQ96F46 866 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 TMX3Q96JJ7 454 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 CLPTM1LQ96KA5 538 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 ZNF512Q96ME7 567 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 MYOCQ99972 504 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 LSM14BQ9BX40 385 aaKnown RBP3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 SERHL2Q9H4I8 314 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 LANCL2Q9NS86 450 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 C1orf112Q9NSG2 853 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 TDP1Q9NUW8 608 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 GOLGA6AQ9NYA3 693 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 NCDNQ9UBB6 729 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 FRMD4BQ9Y2L6 1034 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 COL4A3Q01955 1670 aa3.74□□□□□ -1.81
HMGB1P30-201ENST00000492455 PNPLA7Q6ZV29 1317 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 CENPVL1A0A0U1RR11 272 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 CXorf49A8MYA2 514 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 HOXA3O43365 443 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 GPR32O75388 356 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 HOXB6P17509 224 aaKnown RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 HTR1BP28222 390 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 SLC6A4P31645 630 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 PTPN7P35236 360 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 FLT3LGP49771 235 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 AGFG1P52594 562 aaKnown RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 NPEPPSP55786 919 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 CTXN1P60606 82 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 NKX6-1P78426 367 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 APBA1Q02410 837 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 NOGQ13253 232 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 SNAPC2Q13487 334 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 MAP9Q49MG5 647 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 KHDC1Q4VXA5 237 aaKnown RBP3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 PRR16Q569H4 304 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 FAM47AQ5JRC9 791 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 C1QL3Q5VWW1 255 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 AFMIDQ63HM1 303 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 FAM180AQ6UWF9 173 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 GPRIN1Q7Z2K8 1008 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 TTC7BQ86TV6 843 aa3.73□□□□□ -1.81
HMGB1P30-201ENST00000492455 PLXDC1Q8IUK5 500 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms