RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 NDUFAB1O14561 156 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 GRAP2O75791 330 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 IL18RAPO95256 599 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 MOCS2O96007 188 aaPredicted RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 EIF4A3P38919 411 aaKnown RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 SNX16P57768 344 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 DLG4P78352 724 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 CKAP4Q07065 602 aaKnown RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 PPIGQ13427 754 aaKnown RBP eCLIP4.78□□□□□ -1.643e-7■■■□□ 16.4
TRA2B-215ENST00000492417 SGSM1Q2NKQ1 1148 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 EDRF1Q3B7T1 1238 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 ZNF697Q5TEC3 545 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 SLC39A5Q6ZMH5 540 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 ZNF365Q70YC5 407 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 B4GALNT4Q76KP1 1039 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 FRMD5Q7Z6J6 570 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 ADAT2Q7Z6V5 191 aaKnown RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 SPATA24Q86W54 205 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 FMNL3Q8IVF7 1028 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 MAP4K3Q8IVH8 894 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 DHX40Q8IX18 779 aaKnown RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 ELMOD1Q8N336 334 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 TAB3Q8N5C8 712 aaPredicted RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 DHX38Q92620 1227 aaKnown RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 C18orf25Q96B23 403 aaPredicted RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 GCNAQ96QF7 691 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 ACO2Q99798 780 aaKnown RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 SELENOOQ9BVL4 669 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 MAK16Q9BXY0 300 aaKnown RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 CHORDC1Q9UHD1 332 aaPredicted RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 GNEQ9Y223 722 aaKnown RBP4.78□□□□□ -1.64
TRA2B-215ENST00000492417 CDK5RAP2Q96SN8 1893 aa4.78□□□□□ -1.64
TRA2B-215ENST00000492417 MYH6P13533 1939 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 MYH8P13535 1937 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 DPYSL4O14531 572 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 SLC26A4O43511 780 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 LGR5O75473 907 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 LYPLA2O95372 231 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 RPLP2P05387 115 aaKnown RBP4.77□□□□□ -1.65
TRA2B-215ENST00000492417 H2AFZP0C0S5 128 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 MAPTP10636 758 aaKnown RBP4.77□□□□□ -1.65
TRA2B-215ENST00000492417 MCF2P10911 925 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 FERP16591 822 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 GARTP22102 1010 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 KLRC2P26717 231 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 CYP24A1Q07973 514 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 PTK7Q13308 1070 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 KYAT1Q16773 422 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 NOMO2Q5JPE7 1267 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 NAA35Q5VZE5 725 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 LLGL2Q6P1M3 1020 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 CLEC17AQ6ZS10 378 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 H2AFVQ71UI9 128 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 CPLX4Q7Z7G2 160 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 ERICH1Q86X53 443 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 ZSWIM2Q8NEG5 633 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 SLC30A5Q8TAD4 765 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 ZNF507Q8TCN5 953 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 TATDN2Q93075 761 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 HVCN1Q96D96 273 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 ABHD8Q96I13 439 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 ZNF512Q96ME7 567 aaPredicted RBP4.77□□□□□ -1.65
TRA2B-215ENST00000492417 MBOAT7Q96N66 472 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 TSPYL2Q9H2G4 693 aaPredicted RBP4.77□□□□□ -1.65
TRA2B-215ENST00000492417 RNF39Q9H2S5 420 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 CYP4F11Q9HBI6 524 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 Q9Y3F1 56 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 FHOD1Q9Y613 1164 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 DOCK3Q8IZD9 2030 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 KAT6AQ92794 2004 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 UMODL1Q5DID0 1318 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 MYH4Q9Y623 1939 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 TTC26A0AVF1 554 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 CCDC160A6NGH7 325 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 KIAA0391O15091 583 aaKnown RBP4.77□□□□□ -1.65
TRA2B-215ENST00000492417 KLRC4O43908 158 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 CALCAP01258 141 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 ADRB2P07550 413 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 ACTN2P35609 894 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 GATMP50440 423 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 RAB27AP51159 221 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 VEPH1Q14D04 833 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 IFI16Q16666 785 aaKnown RBP4.77□□□□□ -1.65
TRA2B-215ENST00000492417 SV2CQ496J9 727 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 SGO2Q562F6 1265 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 FBXO47Q5MNV8 452 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 TTI2Q6NXR4 508 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 ZPBP2Q6X784 338 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 SLC24A5Q71RS6 500 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 TMTC1Q8IUR5 882 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 KAT2BQ92831 832 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 TNIP3Q96KP6 325 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 CARD6Q9BX69 1037 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 AGO3Q9H9G7 860 aaKnown RBP4.77□□□□□ -1.65
TRA2B-215ENST00000492417 TMEM8AQ9HCN3 771 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 AGPAT5Q9NUQ2 364 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.77□□□□□ -1.65
TRA2B-215ENST00000492417 CTAGE9A4FU28 777 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 SOWAHDA6NJG2 315 aa4.77□□□□□ -1.65
TRA2B-215ENST00000492417 PODXLO00592 558 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms