RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 TIGD1Q96MW7 591 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 CLSTN3Q9BQT9 956 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 APOL5Q9BWW9 433 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 S1PR5Q9H228 398 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 KCTD10Q9H3F6 313 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 PDE11AQ9HCR9 933 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 RBAKQ9NYW8 714 aaPredicted RBP19.21■□□□□ 0.67
LMNB1-206ENST00000492190 FNIP2Q9P278 1114 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 CDH22Q9UJ99 828 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 SSX2IPQ9Y2D8 614 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 MYO10Q9HD67 2058 aa19.21■□□□□ 0.67
LMNB1-206ENST00000492190 ANO9A1A5B4 782 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 PIRO00625 290 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 KIAA0391O15091 583 aaKnown RBP19.2■□□□□ 0.66
LMNB1-206ENST00000492190 XPOTO43592 962 aaKnown RBP19.2■□□□□ 0.66
LMNB1-206ENST00000492190 CYP2J2P51589 502 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 SMAD4Q13485 552 aaKnown RBP19.2■□□□□ 0.66
LMNB1-206ENST00000492190 C9orf57Q5W0N0 161 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 C12orf56Q8IXR9 622 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 C12orf76Q8N812 135 aaPredicted RBP19.2■□□□□ 0.66
LMNB1-206ENST00000492190 BEST2Q8NFU1 509 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 ADAMTS19Q8TE59 1207 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 CASP10Q92851 521 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 SUSD3Q96L08 255 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.2■□□□□ 0.66
LMNB1-206ENST00000492190 PTPRJQ12913 1337 aa19.2■□□□□ 0.66
LMNB1-206ENST00000492190 SPTLC1O15269 473 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 TRAPPC3O43617 180 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 ADH1AP07327 375 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 AARSP49588 968 aaKnown RBP eCLIP19.19■□□□□ 0.666e-7■■■■□ 19.6
LMNB1-206ENST00000492190 SNRPFP62306 86 aaKnown RBP19.19■□□□□ 0.66
LMNB1-206ENST00000492190 LILRA6Q6PI73 481 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 HS2ST1Q7LGA3 356 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 PPFIBP1Q86W92 1011 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 PALB2Q86YC2 1186 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 SPATA20Q8TB22 786 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 GZF1Q9H116 711 aaPredicted RBP19.19■□□□□ 0.66
LMNB1-206ENST00000492190 DPP3Q9NY33 737 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 MAPK8IP1Q9UQF2 711 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 NUB1Q9Y5A7 615 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 DOCK8Q8NF50 2099 aa19.19■□□□□ 0.66
LMNB1-206ENST00000492190 ZNF233A6NK53 670 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 M0QZQ0 153 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 SPATA31D3P0C874 917 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 MCM4P33991 863 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 MRPL58Q14197 206 aaKnown RBP19.18■□□□□ 0.66
LMNB1-206ENST00000492190 SMAD2Q15796 467 aaKnown RBP19.18■□□□□ 0.66
LMNB1-206ENST00000492190 SNRNP35Q16560 246 aaKnown RBP19.18■□□□□ 0.66
LMNB1-206ENST00000492190 PUS10Q3MIT2 529 aaKnown RBP19.18■□□□□ 0.66
LMNB1-206ENST00000492190 LMBRD2Q68DH5 695 aaPredicted RBP19.18■□□□□ 0.66
LMNB1-206ENST00000492190 SPATA31D4Q6ZUB0 917 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 SMYD4Q8IYR2 804 aaPredicted RBP19.18■□□□□ 0.66
LMNB1-206ENST00000492190 RDH13Q8NBN7 331 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 CXorf38Q8TB03 319 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 SUSD6Q92537 303 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 IPO9Q96P70 1041 aaKnown RBP19.18■□□□□ 0.66
LMNB1-206ENST00000492190 DMAC2Q9NW81 257 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 MTRRQ9UBK8 725 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 USP15Q9Y4E8 981 aaPredicted RBP19.18■□□□□ 0.66
LMNB1-206ENST00000492190 PCDHA5Q9Y5H7 936 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.18■□□□□ 0.66
LMNB1-206ENST00000492190 NOTCH4Q99466 2003 aa19.18■□□□□ 0.66
LMNB1-206ENST00000492190 PDXKO00764 312 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 SYN3O14994 580 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 TGM5O43548 720 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 TBC1D4O60343 1298 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 SRGAP2BP0DMP2 458 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 HOXB8P17481 243 aaPredicted RBP19.17■□□□□ 0.66
LMNB1-206ENST00000492190 LILRA4P59901 499 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 TFAMQ00059 246 aaKnown RBP19.17■□□□□ 0.66
LMNB1-206ENST00000492190 VARS2Q5ST30 1063 aaKnown RBP19.17■□□□□ 0.66
LMNB1-206ENST00000492190 NT5DC4Q86YG4 428 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 C1orf127Q8N9H9 656 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 XXYLT1Q8NBI6 393 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 OR5B17Q8NGF7 314 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 CCDC47Q96A33 483 aaKnown RBP19.17■□□□□ 0.66
LMNB1-206ENST00000492190 MAN1C1Q9NR34 630 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 CGNQ9P2M7 1197 aaKnown RBP19.17■□□□□ 0.66
LMNB1-206ENST00000492190 PCDHB8Q9UN66 801 aa19.17■□□□□ 0.66
LMNB1-206ENST00000492190 TULP1O00294 542 aaPredicted RBP19.16■□□□□ 0.66
LMNB1-206ENST00000492190 PRPF40AO75400 957 aaKnown RBP19.16■□□□□ 0.66
LMNB1-206ENST00000492190 GLUD1P00367 558 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 WEE2P0C1S8 567 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 OR1D2P34982 312 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 CREMQ03060 361 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 CYP24A1Q07973 514 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 RARS2Q5T160 578 aaKnown RBP19.16■□□□□ 0.66
LMNB1-206ENST00000492190 CLEC17AQ6ZS10 378 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 ELOA2Q8IYF1 753 aaPredicted RBP19.16■□□□□ 0.66
LMNB1-206ENST00000492190 GUF1Q8N442 669 aaKnown RBP19.16■□□□□ 0.66
LMNB1-206ENST00000492190 PLEKHO2Q8TD55 490 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 BORCS6Q96GS4 357 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 UHRF1Q96T88 793 aaPredicted RBP19.16■□□□□ 0.66
LMNB1-206ENST00000492190 KIAA1586Q9HCI6 787 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 CD320Q9NPF0 282 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 INTS13Q9NVM9 706 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 DZANK1Q9NVP4 752 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 SIX4Q9UIU6 781 aa19.16■□□□□ 0.66
LMNB1-206ENST00000492190 TIMM13Q9Y5L4 95 aaPredicted RBP19.16■□□□□ 0.66
LMNB1-206ENST00000492190 BACE2Q9Y5Z0 518 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms