RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 MCF2P10911 925 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 GAP43P17677 238 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 PBX1P40424 430 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 LMAN1P49257 510 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 ALDH7A1P49419 539 aaKnown RBP10.17□□□□□ -0.78
BRCA1-219ENST00000491747 MCL1Q07820 350 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 COASYQ13057 564 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 CUL4BQ13620 913 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 PTPROQ16827 1216 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 HERC4Q5GLZ8 1057 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-219ENST00000491747 ZBTB41Q5SVQ8 909 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 BEND6Q5SZJ8 279 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-219ENST00000491747 CDKAL1Q5VV42 579 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 KLHL10Q6JEL2 608 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 CNNM4Q6P4Q7 775 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 MAP4K3Q8IVH8 894 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 HACE1Q8IYU2 909 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 CPLX3Q8WVH0 158 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 RSPH1Q8WYR4 309 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 IGSF21Q96ID5 467 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 PAAF1Q9BRP4 392 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 TCHPQ9BT92 498 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 ANKZF1Q9H8Y5 726 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 MARCH5Q9NX47 278 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 PUF60Q9UHX1 559 aaKnown RBP10.17□□□□□ -0.78
BRCA1-219ENST00000491747 FSCN2O14926 492 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 FAM189A1O60320 539 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 IGFBP6P24592 240 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-219ENST00000491747 TNFSF9P41273 254 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 GLRA4Q5JXX5 417 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 LEKR1Q6ZMV7 388 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 TMTC1Q8IUR5 882 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 TMEM130Q8N3G9 435 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 BICD1Q96G01 975 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 PAGE5Q96GU1 130 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 FAM193BQ96PV7 902 aaPredicted RBP10.17□□□□□ -0.78
BRCA1-219ENST00000491747 NSUN3Q9H649 340 aaKnown RBP10.17□□□□□ -0.78
BRCA1-219ENST00000491747 OLFML3Q9NRN5 406 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 SEL1LQ9UBV2 794 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 ZMYM2Q9UBW7 1377 aa10.17□□□□□ -0.78
BRCA1-219ENST00000491747 CTAGE15A4D2H0 777 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 CLDN3O15551 220 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 ALDH2P05091 517 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 CTAGE8P0CG41 777 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 FECHP22830 423 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 CASP14P31944 242 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 OR1G1P47890 313 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 LIG4P49917 911 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 ASIC1P78348 528 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 UBE3AQ05086 875 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 EHHADHQ08426 723 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 HYAL1Q12794 435 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 GRIK3Q13003 919 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 WHAMMP3Q1A5X7 153 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 CTAGE6Q86UF2 777 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 CTAGE4Q8IX94 777 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 ANKRD20A12PQ8NF67 263 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 ZMAT2Q96NC0 199 aaKnown RBP10.16□□□□□ -0.78
BRCA1-219ENST00000491747 NAPGQ99747 312 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-219ENST00000491747 TMEM175Q9BSA9 504 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 ACBD3Q9H3P7 528 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 TLR9Q9NR96 1032 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 LZTS1Q9Y250 596 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 FAN1Q9Y2M0 1017 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 PRG3Q9Y2Y8 225 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-219ENST00000491747 H3BQF6 201 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 HNRNPDLO14979 420 aaKnown RBP10.16□□□□□ -0.78
BRCA1-219ENST00000491747 KLRC4O43908 158 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 PRPF6O94906 941 aaKnown RBP10.16□□□□□ -0.78
BRCA1-219ENST00000491747 GCNT3O95395 438 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 EFEMP2O95967 443 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 GYPCP04921 128 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 HOXD13P35453 343 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 ACTN2P35609 894 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 PPM1AP35813 382 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 STX17P56962 302 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 AMPD3Q01432 767 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 TFF2Q03403 129 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 SPAG1Q07617 926 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 TRIM14Q14142 442 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 SKIV2LQ15477 1246 aaKnown RBP10.16□□□□□ -0.78
BRCA1-219ENST00000491747 SLC10A6Q3KNW5 377 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 TIGD5Q53EQ6 642 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 HSP90B2PQ58FF3 399 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 XKR4Q5GH76 650 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 TAS1R1Q7RTX1 841 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 CCDC65Q8IXS2 484 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 PPP1R10Q96QC0 940 aaKnown RBP10.16□□□□□ -0.78
BRCA1-219ENST00000491747 RPS6KC1Q96S38 1066 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 LRRC27Q9C0I9 530 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 MAGEF1Q9HAY2 307 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 PDE11AQ9HCR9 933 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 L1RE1Q9UN81 338 aa10.16□□□□□ -0.78
BRCA1-219ENST00000491747 A0A0B4J269 797 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 SMIM28A0A1B0GU29 152 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 HIDE1A8MVS5 230 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 LINC01565O15544 149 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 THP07101 528 aa10.15□□□□□ -0.78
BRCA1-219ENST00000491747 IVLP07476 585 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms