RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 VTA1Q9NP79 307 aa5.05□□□□□ -1.6
CLIP4-211ENST00000491701 TOMM22Q9NS69 142 aa5.05□□□□□ -1.6
CLIP4-211ENST00000491701 TRMT13Q9NUP7 481 aaKnown RBP5.05□□□□□ -1.6
CLIP4-211ENST00000491701 FBXO28Q9NVF7 368 aa5.05□□□□□ -1.6
CLIP4-211ENST00000491701 GGA3Q9NZ52 723 aa5.05□□□□□ -1.6
CLIP4-211ENST00000491701 VPS54Q9P1Q0 977 aa5.05□□□□□ -1.6
CLIP4-211ENST00000491701 NOL7Q9UMY1 257 aaKnown RBP5.05□□□□□ -1.6
CLIP4-211ENST00000491701 PCDHGB3Q9Y5G1 929 aa5.05□□□□□ -1.6
CLIP4-211ENST00000491701 WDR33Q9C0J8 1336 aaKnown RBP5.05□□□□□ -1.6
CLIP4-211ENST00000491701 LOC285556D6RIA3 1793 aa5.05□□□□□ -1.6
CLIP4-211ENST00000491701 CASP8AP2Q9UKL3 1982 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 FAM237AA0A1B0GTK4 181 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 MEIS2O14770 477 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 FIBPO43427 364 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 PEX10O60683 326 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 CTNND1O60716 968 aaKnown RBP5.04□□□□□ -1.6
CLIP4-211ENST00000491701 RHOBTB3O94955 611 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 AGR2O95994 175 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 MMP1P03956 469 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 HLA-DOAP06340 250 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 SLC3A2P08195 630 aaKnown RBP5.04□□□□□ -1.6
CLIP4-211ENST00000491701 RHCEP18577 417 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 RRM1P23921 792 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 CALRP27797 417 aaKnown RBP5.04□□□□□ -1.6
CLIP4-211ENST00000491701 CTCFP49711 727 aaPredicted RBP5.04□□□□□ -1.6
CLIP4-211ENST00000491701 PMS1P54277 932 aaKnown RBP5.04□□□□□ -1.6
CLIP4-211ENST00000491701 KRT85P78386 507 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 HMGN5P82970 282 aaKnown RBP5.04□□□□□ -1.6
CLIP4-211ENST00000491701 RHDQ02161 417 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 TBX2Q13207 712 aaPredicted RBP5.04□□□□□ -1.6
CLIP4-211ENST00000491701 TOMM20Q15388 145 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 CCDC178Q5BJE1 867 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 TMEM201Q5SNT2 666 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 ZCCHC8Q6NZY4 707 aaKnown RBP5.04□□□□□ -1.6
CLIP4-211ENST00000491701 PGM2L1Q6PCE3 622 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 B3GNT9Q6UX72 402 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 NFXL1Q6ZNB6 911 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 USP50Q70EL3 339 aaPredicted RBP5.04□□□□□ -1.6
CLIP4-211ENST00000491701 KCTD1Q719H9 257 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 ARMCX6Q7L4S7 300 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 CATIPQ7Z7H3 387 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 IQCA1Q86XH1 822 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 NXPE1Q8N323 547 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 CLEC4DQ8WXI8 215 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 COA7Q96BR5 231 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 CDCA5Q96FF9 252 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 CDK5RAP3Q96JB5 506 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 C12orf42Q96LP6 360 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 MIPEPQ99797 713 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 LGR4Q9BXB1 951 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 KIAA1683Q9H0B3 1180 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 IFT122Q9HBG6 1241 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 C1GALT1Q9NS00 363 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 FNIP2Q9P278 1114 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 PCDHA6Q9UN73 950 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 DNM3Q9UQ16 869 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 PCDHA8Q9Y5H6 950 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 MRFAP1Q9Y605 127 aa5.04□□□□□ -1.6
CLIP4-211ENST00000491701 A0A0G2JMZ2 1700 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 KIAA1217Q5T5P2 1943 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 ZNF891A8MT65 544 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-211ENST00000491701 C9IYK1 514 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 hCG_1984214I3L0E3 225 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 DLX3O60479 287 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 SNX2O60749 519 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 HIP1RO75146 1068 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 ULK1O75385 1050 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 CNMDO75829 334 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 DEXIO95424 95 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 TP53P04637 393 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-211ENST00000491701 CALM1P0DP23 149 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 CALM2P0DP24 149 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 CALM3P0DP25 149 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 SCG2P13521 617 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 NTF4P34130 210 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 TERF1P54274 439 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 DSG1Q02413 1049 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 GHRHRQ02643 423 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 RING1Q06587 406 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 SNW1Q13573 536 aaKnown RBP5.03□□□□□ -1.6
CLIP4-211ENST00000491701 PDE1CQ14123 709 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-211ENST00000491701 TRIM14Q14142 442 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 PDCD2Q16342 344 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-211ENST00000491701 QRICH1Q2TAL8 776 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 CYP27C1Q4G0S4 372 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 PRAMEF13Q5VWM6 474 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 USP49Q70CQ1 688 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 SRGAP1Q7Z6B7 1085 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 APOBEC3FQ8IUX4 373 aaKnown RBP5.03□□□□□ -1.6
CLIP4-211ENST00000491701 SCYL3Q8IZE3 742 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 ZNF513Q8N8E2 541 aaPredicted RBP5.03□□□□□ -1.6
CLIP4-211ENST00000491701 DAGLBQ8NCG7 672 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 LINC00301Q8NCQ3 95 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 FAM13CQ8NE31 585 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 DCAF4Q8WV16 495 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 PIBF1Q8WXW3 757 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 CCT6BQ92526 530 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 C8orf76Q96K31 380 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 MBOAT7Q96N66 472 aa5.03□□□□□ -1.6
CLIP4-211ENST00000491701 ZNF341Q9BYN7 854 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms