RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 SEZ6Q53EL9 994 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 XKR4Q5GH76 650 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 GPBP1Q86WP2 473 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 FSIP1Q8NA03 581 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 ITFG1Q8TB96 612 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 SLC7A14Q8TBB6 771 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 GPR152Q8TDT2 470 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 LRRC15Q8TF66 581 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 ZBTB45Q96K62 511 aaPredicted RBP12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 TNMDQ9H2S6 317 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 ZHX3Q9H4I2 956 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 KMT5AQ9NQR1 393 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 BLOC1S4Q9NUP1 217 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 MTRRQ9UBK8 725 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 ODF2LQ9ULJ1 636 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 CDY1Q9Y6F8 540 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 NUMBLQ9Y6R0 609 aa12.03□□□□□ -0.48
TMEM39A-211ENST00000491685 NPHP3-ACAD11A0A0J9YXS1 232 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 TBCAO75347 108 aaKnown RBP12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 B3GAT3O94766 335 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 FAM13AO94988 1023 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 ZNF202O95125 648 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 MYL1P05976 194 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 SLFN14P0C7P3 912 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 SRFP11831 508 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 PFKFB1P16118 471 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 OR1D2P34982 312 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 UBE2HP62256 183 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 ELAVL2Q12926 359 aaKnown RBP12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 DMP1Q13316 513 aaPredicted RBP12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 RAB33AQ14088 237 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 PPM1LQ5SGD2 360 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 LIN9Q5TKA1 542 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 PDXDC1Q6P996 788 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 POTEHQ6S545 545 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 ALKAL1Q6UXT8 129 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 FRMD5Q7Z6J6 570 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 CCDC65Q8IXS2 484 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 MYCT1Q8N699 235 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 FGF14Q92915 247 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 C18orf25Q96B23 403 aaPredicted RBP12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 MRPL4Q9BYD3 311 aaKnown RBP12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 HAPLN2Q9GZV7 340 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 TMEM134Q9H6X4 195 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 POLIQ9UNA4 740 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 FANCMQ8IYD8 2048 aa12.02□□□□□ -0.49
TMEM39A-211ENST00000491685 FAM237AA0A1B0GTK4 181 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 PODXLO00592 558 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 GAP43P17677 238 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 DCLRE1AQ6PJP8 1040 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 PARM1Q6UWI2 310 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 MPZL3Q6UWV2 235 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 DYMQ7RTS9 669 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 ADSSL1Q8N142 457 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 DDX12PQ92771 950 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 FGF13Q92913 245 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 CHAMP1Q96JM3 812 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 NTPCRQ9BSD7 190 aaKnown RBP12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 CCDC94Q9BW85 323 aaPredicted RBP12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 TBC1D17Q9HA65 648 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 PARVGQ9HBI0 331 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 ANKFY1Q9P2R3 1169 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 WNT16Q9UBV4 365 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 TUBGCP4Q9UGJ1 667 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 SERTAD1Q9UHV2 236 aa12.01□□□□□ -0.49
TMEM39A-211ENST00000491685 TICRRQ7Z2Z1 1910 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 WDR27A2RRH5 827 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 HNRNPA1P09651 372 aaKnown RBP eCLIP12□□□□□ -0.493e-6■■■■□ 19.4
TMEM39A-211ENST00000491685 MAPTP10636 758 aaKnown RBP12□□□□□ -0.49
TMEM39A-211ENST00000491685 MCF2P10911 925 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 PLS3P13797 630 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 IDEP14735 1019 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 HOXA9P31269 272 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 NDUFA8P51970 172 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 YARSP54577 528 aaKnown RBP12□□□□□ -0.49
TMEM39A-211ENST00000491685 ROR1Q01973 937 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 FAM160A1Q05DH4 1040 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 STRN3Q13033 797 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 SLC5A9Q2M3M2 681 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 VARS2Q5ST30 1063 aaKnown RBP12□□□□□ -0.49
TMEM39A-211ENST00000491685 STXBP4Q6ZWJ1 553 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 DTWD2Q8NBA8 298 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 TMEM161BQ8NDZ6 487 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 ING5Q8WYH8 240 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 TIGD1Q96MW7 591 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 UROC1Q96N76 676 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 C7orf25Q9BPX7 421 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 KXD1Q9BQD3 176 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 ARHGEF3Q9NR81 526 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 PANK4Q9NVE7 773 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 KBTBD4Q9NVX7 518 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12□□□□□ -0.49
TMEM39A-211ENST00000491685 CNTN3Q9P232 1028 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 DNMT3BQ9UBC3 853 aaKnown RBP12□□□□□ -0.49
TMEM39A-211ENST00000491685 SEL1LQ9UBV2 794 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 CDH7Q9ULB5 785 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 HPSEQ9Y251 543 aa12□□□□□ -0.49
TMEM39A-211ENST00000491685 BACE2Q9Y5Z0 518 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms