RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 HOXA6P31267 233 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 FNTBP49356 437 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 OSTNP61366 133 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 NBR1Q14596 966 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 MAPK6Q16659 721 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 FAM187BQ17R55 369 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 SLC5A9Q2M3M2 681 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 PSAPL1Q6NUJ1 521 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 LONP2Q86WA8 852 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 CEP120Q8N960 986 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 MCPH1Q8NEM0 835 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 PRIMPOLQ96LW4 560 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 KCNH3Q9ULD8 1083 aa12.2□□□□□ -0.46
NCSTN-214ENST00000491390 CELSR3Q9NYQ7 3312 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 ACKR2O00590 384 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 XYLBO75191 536 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 EPN2O95208 641 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 CHRNB1P11230 501 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
NCSTN-214ENST00000491390 CEBPBP17676 345 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 CYP11B2P19099 503 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 FGFR3P22607 806 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 FCARP24071 287 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 RAP1GAPP47736 663 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 CXCL12P48061 93 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 ARPP19P56211 112 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 SOX4Q06945 474 aaPredicted RBP12.19□□□□□ -0.46
NCSTN-214ENST00000491390 RAB33AQ14088 237 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 TRIM29Q14134 588 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 ANKRD1Q15327 319 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 PABPC1LQ4VXU2 614 aaKnown RBP12.19□□□□□ -0.46
NCSTN-214ENST00000491390 SOWAHCQ53LP3 525 aaPredicted RBP12.19□□□□□ -0.46
NCSTN-214ENST00000491390 SPEM1Q8N4L4 309 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
NCSTN-214ENST00000491390 LOXL4Q96JB6 756 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
NCSTN-214ENST00000491390 NACC1Q96RE7 527 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 ADPGKQ9BRR6 497 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 TRPV5Q9NQA5 729 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 MTRRQ9UBK8 725 aa12.19□□□□□ -0.46
NCSTN-214ENST00000491390 NDRG2Q9UN36 371 aaKnown RBP12.19□□□□□ -0.46
NCSTN-214ENST00000491390 ZMYM2Q9UBW7 1377 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 TOP3BO95985 862 aaKnown RBP12.18□□□□□ -0.46
NCSTN-214ENST00000491390 RHOP08100 348 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 SPINK2P20155 84 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 ANP32AP39687 249 aaKnown RBP12.18□□□□□ -0.46
NCSTN-214ENST00000491390 NAMPTP43490 491 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 ATF7IP2Q5U623 682 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.18□□□□□ -0.46
NCSTN-214ENST00000491390 ZCCHC14Q8WYQ9 949 aaKnown RBP12.18□□□□□ -0.46
NCSTN-214ENST00000491390 ELSPBP1Q96BH3 223 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 TCEAL4Q96EI5 215 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
NCSTN-214ENST00000491390 C2orf40Q9H1Z8 148 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 LMAN1LQ9HAT1 526 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 GDE1Q9NZC3 331 aa12.18□□□□□ -0.46
NCSTN-214ENST00000491390 MRPS23Q9Y3D9 190 aaKnown RBP12.18□□□□□ -0.46
NCSTN-214ENST00000491390 GIPC1O14908 333 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 OR52Z1P0C646 297 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 HARSP12081 509 aaKnown RBP12.17□□□□□ -0.46
NCSTN-214ENST00000491390 RPA1P27694 616 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 CCT6AP40227 531 aaKnown RBP12.17□□□□□ -0.46
NCSTN-214ENST00000491390 NEK4P51957 841 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 ELAVL2Q12926 359 aaKnown RBP12.17□□□□□ -0.46
NCSTN-214ENST00000491390 PTGDRQ13258 359 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 GRM2Q14416 872 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 UPP1Q16831 310 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 TANGO2Q6ICL3 276 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 MAP4K3Q8IVH8 894 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 C12orf50Q8NA57 414 aaPredicted RBP12.17□□□□□ -0.46
NCSTN-214ENST00000491390 ZMAT2Q96NC0 199 aaKnown RBP12.17□□□□□ -0.46
NCSTN-214ENST00000491390 CORO1BQ9BR76 489 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 ARRDC1-AS1Q9H2J1 176 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 BHMT2Q9H2M3 363 aa12.17□□□□□ -0.46
NCSTN-214ENST00000491390 AVENQ9NQS1 362 aaPredicted RBP12.17□□□□□ -0.46
NCSTN-214ENST00000491390 SMIM28A0A1B0GU29 152 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 WDR27A2RRH5 827 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 CCDC169A6NNP5 214 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 SEC24AO95486 1093 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 CCR2P41597 374 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 NOVA1P51513 510 aaKnown RBP12.16□□□□□ -0.46
NCSTN-214ENST00000491390 PEX3P56589 373 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 ANAPC15P60006 121 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 ROR1Q01973 937 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 ZNF252P-AS1Q0IIN9 211 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 FOXC1Q12948 553 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 CCDC6Q16204 474 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 DCAF4L1Q3SXM0 396 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 SEZ6Q53EL9 994 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 WDR44Q5JSH3 913 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 TAS1R3Q7RTX0 852 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 WDR5BQ86VZ2 330 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 CCDC83Q8IWF9 413 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 HS6ST3Q8IZP7 471 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 C18orf25Q96B23 403 aaPredicted RBP12.16□□□□□ -0.46
NCSTN-214ENST00000491390 IFT74Q96LB3 600 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 TARS2Q9BW92 718 aaKnown RBP12.16□□□□□ -0.46
NCSTN-214ENST00000491390 CDT1Q9H211 546 aa12.16□□□□□ -0.46
NCSTN-214ENST00000491390 C2orf42Q9NWW7 574 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms