RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 GRIN1Q05586 938 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 SOX4Q06945 474 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 CYP4A22Q5TCH4 519 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 ASTLQ6HA08 431 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 METTL23Q86XA0 190 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 SHDQ96IW2 340 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 ZNF512Q96ME7 567 aaPredicted RBP17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 CUEDC2Q9H467 287 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 TMEM206Q9H813 350 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 AGO2Q9UKV8 859 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 MRPS23Q9Y3D9 190 aaKnown RBP17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 LACTBL1A8MY62 500 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 SPTLC2O15270 562 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 GCNT3O95395 438 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 SRFP11831 508 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 NMT1P30419 496 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 NASPP49321 788 aaPredicted RBP17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 PLD1Q13393 1074 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 TMEM132DQ14C87 1099 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 ZNF720Q7Z2F6 126 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 SLC44A3Q8N4M1 653 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 LEMD2Q8NC56 503 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 C3orf58Q8NDZ4 430 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 PYM1Q9BRP8 204 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 AFF4Q9UHB7 1163 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 FBXL5Q9UKA1 691 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 DSEQ9UL01 958 aa17.98■□□□□ 0.47
PDLIM2-217ENST00000491330 OR6C75A6NL08 312 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 PPP6R2O75170 966 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 IL18RAPO95256 599 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 YEATS4O95619 227 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 ODC1P11926 461 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 PFKPQ01813 784 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 ROR1Q01973 937 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 NHLH1Q02575 133 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 SFR1Q86XK3 245 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 NT5DC4Q86YG4 428 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 TCEAL8Q8IYN2 117 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 THEM5Q8N1Q8 247 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 CACTINQ8WUQ7 758 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 CLIC6Q96NY7 704 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 USP28Q96RU2 1077 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 MYADMQ96S97 322 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 PANK2Q9BZ23 570 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 GDE1Q9NZC3 331 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 CPSF3Q9UKF6 684 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 CFAP45Q9UL16 551 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 MUC3AQ02505 3323 aa17.97■□□□□ 0.47
PDLIM2-217ENST00000491330 ADAM12O43184 909 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 ABLIM3O94929 683 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 CFHP08603 1231 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 SPAG1Q07617 926 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 SPATA1Q5VX52 437 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 FAM173BQ6P4H8 233 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 PDZD4Q76G19 769 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 SIX5Q8N196 739 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 IQUBQ8NA54 791 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 ATOH1Q92858 354 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 PANK4Q9NVE7 773 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 FAM13BQ9NYF5 915 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 TUBGCP4Q9UGJ1 667 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 C2CD2Q9Y426 696 aa17.96■□□□□ 0.47
PDLIM2-217ENST00000491330 M0QZQ0 153 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 KIAA0391O15091 583 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 CUTAO60888 179 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 ZSCAN22P10073 491 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 TNFSF9P41273 254 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 ALDH1A3P47895 512 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 ACOT2P49753 483 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 ADCY1Q08828 1119 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 MRPL58Q14197 206 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 ZBTB6Q15916 424 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 ENOX2Q16206 610 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 ZC2HC1CQ53FD0 456 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 L1TD1Q5T7N2 865 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 OVOS1Q6IE37 1185 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 JADE1Q6IE81 842 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 CD300LGQ6UXG3 332 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 USP49Q70CQ1 688 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 PDILTQ8N807 584 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 KCNG4Q8TDN1 519 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 FGF13Q92913 245 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 TNMDQ9H2S6 317 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 OLFML3Q9NRN5 406 aa17.95■□□□□ 0.46
PDLIM2-217ENST00000491330 WDR27A2RRH5 827 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 MYMKA6NI61 221 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 ANHXE9PGG2 379 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 GALR2O43603 387 aaPredicted RBP17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 OAZ2O95190 189 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 TYMPP19971 482 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 PNPLA4P41247 253 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 EPHB3P54753 998 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 BECN1Q14457 450 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 ALYREFQ86V81 257 aaKnown RBP17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 LINC00301Q8NCQ3 95 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 ZNF560Q96MR9 790 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 CORO1BQ9BR76 489 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 GPR88Q9GZN0 384 aa17.94■□□□□ 0.46
PDLIM2-217ENST00000491330 MAGEF1Q9HAY2 307 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms