RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 CASC4Q6P4E1 433 aa10.39□□□□□ -0.75
ERCC3-208ENST00000491292 TMEM270Q6UE05 265 aa10.39□□□□□ -0.75
ERCC3-208ENST00000491292 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.39□□□□□ -0.752e-6■□□□□ 9.5
ERCC3-208ENST00000491292 RTFDC1Q9BY42 306 aaPredicted RBP10.39□□□□□ -0.75
ERCC3-208ENST00000491292 HSPBP1Q9NZL4 362 aa10.39□□□□□ -0.75
ERCC3-208ENST00000491292 CHMP2BQ9UQN3 213 aa10.39□□□□□ -0.75
ERCC3-208ENST00000491292 COL1A1P02452 1464 aaPredicted RBP10.39□□□□□ -0.75
ERCC3-208ENST00000491292 AKAP11Q9UKA4 1901 aa10.39□□□□□ -0.75
ERCC3-208ENST00000491292 F5H6K3 240 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 ZWINTO95229 277 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 CWF19L1Q69YN2 538 aaKnown RBP10.38□□□□□ -0.75
ERCC3-208ENST00000491292 OTOAQ7RTW8 1153 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 ST13P4Q8IZP2 240 aaPredicted RBP10.38□□□□□ -0.75
ERCC3-208ENST00000491292 ZSWIM2Q8NEG5 633 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 RFWD2Q8NHY2 731 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 MANSC1Q9H8J5 431 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 ARL8BQ9NVJ2 186 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 SAE1Q9UBE0 346 aaPredicted RBP10.38□□□□□ -0.75
ERCC3-208ENST00000491292 DAGLAQ9Y4D2 1042 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 LOC100653049A0A140TA62 436 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 KRT34O76011 436 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 POLR2MP0CAP2 368 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 SPATA31C1P0DKV0 1188 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 MYL2P10916 166 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 ATP6V1B1P15313 513 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 CHRNB2P17787 502 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 NCF2P19878 526 aaPredicted RBP10.38□□□□□ -0.75
ERCC3-208ENST00000491292 BGNP21810 368 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 HOXD13P35453 343 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 KIF22Q14807 665 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 SMTNL2Q2TAL5 461 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 RABGAP1LQ5R372 815 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 RNF43Q68DV7 783 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 USP37Q86T82 979 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 OGFOD1Q8N543 542 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 TCP10LQ8TDR4 215 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 CLPTM1LQ96KA5 538 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 FAM20AQ96MK3 541 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 CENPKQ9BS16 269 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 TMEM121Q9BTD3 319 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 TEKT3Q9BXF9 490 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 CALN1Q9BXU9 219 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 PCSK1NQ9UHG2 260 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 LRCH1Q9Y2L9 728 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 PCDHA2Q9Y5H9 948 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 WASF2Q9Y6W5 498 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.38□□□□□ -0.75
ERCC3-208ENST00000491292 CASZ1Q86V15 1759 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 E2F8A0AVK6 867 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 CYP11B1P15538 503 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 GSTT1P30711 240 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 JAM2P57087 298 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 BRDTQ58F21 947 aaPredicted RBP10.38□□□□□ -0.75
ERCC3-208ENST00000491292 ARHGAP22Q7Z5H3 698 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 ARID3BQ8IVW6 561 aaPredicted RBP10.38□□□□□ -0.75
ERCC3-208ENST00000491292 EFCAB3Q8N7B9 438 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 AGR3Q8TD06 166 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 ACAP3Q96P50 834 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 FAM213AQ9BRX8 229 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 DCLK3Q9C098 648 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 FHDC1Q9C0D6 1143 aaPredicted RBP10.38□□□□□ -0.75
ERCC3-208ENST00000491292 EHMT1Q9H9B1 1298 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 IFT122Q9HBG6 1241 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 KIAA1586Q9HCI6 787 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 CCNL1Q9UK58 526 aaPredicted RBP10.38□□□□□ -0.75
ERCC3-208ENST00000491292 PCDHA3Q9Y5H8 950 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 MYH3P11055 1940 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 MYH1P12882 1939 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 MYH4Q9Y623 1939 aa10.38□□□□□ -0.75
ERCC3-208ENST00000491292 SPECC1L-ADORA2AF8WAN1 911 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 MAP3K6O95382 1288 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 FOSP01100 380 aaPredicted RBP10.37□□□□□ -0.75
ERCC3-208ENST00000491292 RPS6KA3P51812 740 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 MARSP56192 900 aaKnown RBP10.37□□□□□ -0.75
ERCC3-208ENST00000491292 CAV1Q03135 178 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 TFDP1Q14186 410 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 PPP2R5DQ14738 602 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 EFTUD2Q15029 972 aaKnown RBP eCLIP10.37□□□□□ -0.75
ERCC3-208ENST00000491292 SYDE2Q5VT97 1194 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 ZNF720Q7Z2F6 126 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 HAUS6Q7Z4H7 955 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 MFN1Q8IWA4 741 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 GSDMBQ8TAX9 411 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.37□□□□□ -0.75
ERCC3-208ENST00000491292 MTBPQ96DY7 904 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 TMEM120AQ9BXJ8 343 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 NCANO14594 1321 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 MAGEA13PA6NCF6 341 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 MEI4A8MW99 385 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 POLD1P28340 1107 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 HIF1AQ16665 826 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 C11orf63Q6NUN7 778 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 CEP120Q8N960 986 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 MOV10L1Q9BXT6 1211 aaKnown RBP10.37□□□□□ -0.75
ERCC3-208ENST00000491292 GTF3C4Q9UKN8 822 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 SMG5Q9UPR3 1016 aaKnown RBP10.37□□□□□ -0.75
ERCC3-208ENST00000491292 COPEO14579 308 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 CFLARO15519 480 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 GH2P01242 217 aa10.37□□□□□ -0.75
ERCC3-208ENST00000491292 RAB27AP51159 221 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms