RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TRAPPC11Q7Z392 1133 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 DEFB123Q8N688 67 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 OR5B17Q8NGF7 314 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 PLEKHO2Q8TD55 490 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 BCL7CQ8WUZ0 217 aaPredicted RBP17.09■□□□□ 0.33
TRA2A-208ENST00000490942 POF1BQ8WVV4 589 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 HERC2P3Q9BVR0 1158 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 TLR9Q9NR96 1032 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 CHST7Q9NS84 486 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 R3HCC1Q9Y3T6 440 aaKnown RBP17.09■□□□□ 0.33
TRA2A-208ENST00000490942 NUB1Q9Y5A7 615 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 PTPRJQ12913 1337 aa17.09■□□□□ 0.33
TRA2A-208ENST00000490942 FSCN2O14926 492 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 PMM2O15305 246 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 C4BPAP04003 597 aaKnown RBP17.08■□□□□ 0.32
TRA2A-208ENST00000490942 CTSAP10619 480 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 ATICP31939 592 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 TAF6P49848 677 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 LILRA4P59901 499 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 CAMK1Q14012 370 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 TPD52L1Q16890 204 aaPredicted RBP17.08■□□□□ 0.32
TRA2A-208ENST00000490942 USP41Q3LFD5 358 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 ZSCAN23Q3MJ62 389 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 C1orf220Q5T0J3 134 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.08■□□□□ 0.32
TRA2A-208ENST00000490942 C3orf58Q8NDZ4 430 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 TAF4BQ92750 862 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 SUSD3Q96L08 255 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 GAS2L1Q99501 681 aaPredicted RBP17.08■□□□□ 0.32
TRA2A-208ENST00000490942 ZBP1Q9H171 429 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 PRDM12Q9H4Q4 367 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 VRTNQ9H8Y1 702 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 ALG13Q9NP73 1137 aaKnown RBP17.08■□□□□ 0.32
TRA2A-208ENST00000490942 MTMR10Q9NXD2 777 aa17.08■□□□□ 0.32
TRA2A-208ENST00000490942 SYCE3A1L190 88 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 M0QZQ0 153 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 P4HA2O15460 535 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 C1RP00736 705 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 ITGB3P05106 788 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 FGFR3P22607 806 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 POLR2BP30876 1174 aaKnown RBP17.07■□□□□ 0.32
TRA2A-208ENST00000490942 DLG4P78352 724 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 MYL5Q02045 173 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 DSG1Q02413 1049 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 CREMQ03060 361 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 MYO1EQ12965 1108 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 SV2CQ496J9 727 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 CCDC40Q4G0X9 1142 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 TIGD5Q53EQ6 642 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 KRT39Q6A163 491 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 SV2AQ7L0J3 742 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 TRIM59Q8IWR1 403 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 VPS52Q8N1B4 723 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 SPATA18Q8TC71 538 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 GDPD5Q8WTR4 605 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 ZNF516Q92618 1163 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 PPP2R3CQ969Q6 453 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 SLC35C1Q96A29 364 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 EEF2KMTQ96G04 330 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 FAXDC2Q96IV6 333 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 POP1Q99575 1024 aaKnown RBP17.07■□□□□ 0.32
TRA2A-208ENST00000490942 VN1R3Q9BXE9 311 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 OXCT2Q9BYC2 517 aaPredicted RBP17.07■□□□□ 0.32
TRA2A-208ENST00000490942 TMEM8AQ9HCN3 771 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRA2A-208ENST00000490942 SIX4Q9UIU6 781 aa17.07■□□□□ 0.32
TRA2A-208ENST00000490942 N4BP1O75113 896 aaKnown RBP17.06■□□□□ 0.32
TRA2A-208ENST00000490942 URODP06132 367 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 FAM163BP0C2L3 166 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 TYMPP19971 482 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 EEF1GP26641 437 aaKnown RBP17.06■□□□□ 0.32
TRA2A-208ENST00000490942 GLUD2P49448 558 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 GUCY2FP51841 1108 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 SMC1AQ14683 1233 aaKnown RBP17.06■□□□□ 0.32
TRA2A-208ENST00000490942 C11orf57Q6ZUT1 292 aaPredicted RBP17.06■□□□□ 0.32
TRA2A-208ENST00000490942 DPH6Q7L8W6 267 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 APPL2Q8NEU8 664 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 CDX2Q99626 313 aaPredicted RBP17.06■□□□□ 0.32
TRA2A-208ENST00000490942 TCF25Q9BQ70 676 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 TTPALQ9BTX7 342 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 GPR62Q9BZJ7 368 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 GDAP2Q9NXN4 497 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 CACNG4Q9UBN1 327 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 DSEQ9UL01 958 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 PCDHB8Q9UN66 801 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 AGAP1Q9UPQ3 857 aa17.06■□□□□ 0.32
TRA2A-208ENST00000490942 KPNA7A9QM74 516 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 F8W810 466 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 LILRB3O75022 631 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 DNAJB1P25685 340 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 MXI1P50539 228 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 PPP3CAQ08209 521 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 BIRC3Q13489 604 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 TRPC3Q13507 836 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 ANO6Q4KMQ2 910 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 FAM171A1Q5VUB5 890 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 KIAA0319Q5VV43 1072 aa17.05■□□□□ 0.32
TRA2A-208ENST00000490942 TDRD10Q5VZ19 366 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms