RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 AKAP17AQ02040 695 aaKnown RBP9.99□□□□□ -0.81
SRRM1-217ENST00000490543 PRKCQQ04759 706 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 EMC2Q15006 297 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 TMEM132AQ24JP5 1023 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 LYPD4Q6UWN0 246 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 SKAP1Q86WV1 359 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 CLDN23Q96B33 292 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 RNF26Q9BY78 433 aaPredicted RBP9.99□□□□□ -0.81
SRRM1-217ENST00000490543 OSBPL6Q9BZF3 934 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 PLA2G2FQ9BZM2 168 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 CSRNP2Q9H175 543 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 EPC1Q9H2F5 836 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 NCOA5Q9HCD5 579 aaKnown RBP9.99□□□□□ -0.81
SRRM1-217ENST00000490543 HCFC1R1Q9NWW0 138 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 FBXW11Q9UKB1 542 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 VAV3Q9UKW4 847 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 USP18Q9UMW8 372 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 POLIQ9UNA4 740 aa9.99□□□□□ -0.81
SRRM1-217ENST00000490543 TDRD15B5MCY1 1934 aaKnown RBP9.99□□□□□ -0.81
SRRM1-217ENST00000490543 PRR5-ARHGAP8B1AHC4 643 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 TMEM229AB2RXF0 380 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 INO80B-WBP1J3KQ70 363 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 M0R2N6 131 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 B4GALT5O43286 388 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 TADA2AO75478 443 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 C8AP07357 584 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 IFNAR1P17181 557 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 ARF4P18085 180 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-217ENST00000490543 SDHBP21912 280 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 IGFBP6P24592 240 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-217ENST00000490543 PTENP60484 403 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
SRRM1-217ENST00000490543 ARHGAP8P85298 464 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 LMNB2Q03252 620 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 MTAPQ13126 283 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 NPY5RQ15761 445 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 LPAL2Q16609 132 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 ST3GAL2Q16842 350 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 EML3Q32P44 896 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 PPM1LQ5SGD2 360 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 ZBTB41Q5SVQ8 909 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 NOTUMQ6P988 496 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 TPRG1Q6ZUI0 275 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 GPR65Q8IYL9 337 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 LNX1Q8TBB1 728 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-217ENST00000490543 HASPINQ8TF76 798 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 ING5Q8WYH8 240 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 RTKNQ9BST9 563 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 CXCL16Q9H2A7 254 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 SLKQ9H2G2 1235 aaPredicted RBP9.98□□□□□ -0.81
SRRM1-217ENST00000490543 XPNPEP1Q9NQW7 623 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 RGL1Q9NZL6 768 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 DDX25Q9UHL0 483 aaKnown RBP9.98□□□□□ -0.81
SRRM1-217ENST00000490543 PCDHA4Q9UN74 947 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 GIT1Q9Y2X7 761 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 PCDHGA11Q9Y5H2 935 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 NID2Q14112 1375 aa9.98□□□□□ -0.81
SRRM1-217ENST00000490543 CFAP47Q6ZTR5 3102 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 SDK1Q7Z5N4 2213 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 ASAP2O43150 1006 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 P4HBP07237 508 aaKnown RBP9.97□□□□□ -0.81
SRRM1-217ENST00000490543 ADRB1P08588 477 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 HMGB1P09429 215 aaKnown RBP9.97□□□□□ -0.81
SRRM1-217ENST00000490543 HNRNPA1P09651 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
SRRM1-217ENST00000490543 MSX1P28360 303 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 AXLP30530 894 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 YWHABP31946 246 aaKnown RBP9.97□□□□□ -0.81
SRRM1-217ENST00000490543 IRX6P78412 446 aaPredicted RBP9.97□□□□□ -0.81
SRRM1-217ENST00000490543 MBTD1Q05BQ5 628 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 SPEM2Q0P670 501 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 PPP2R5CQ13362 524 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 CTTNQ14247 550 aaKnown RBP9.97□□□□□ -0.81
SRRM1-217ENST00000490543 KRT32Q14532 448 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 HSP90AA2PQ14568 343 aaPredicted RBP9.97□□□□□ -0.81
SRRM1-217ENST00000490543 PSMD5Q16401 504 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 INF2Q27J81 1249 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 XKR9Q5GH70 373 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 LIN9Q5TKA1 542 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 FAM171A1Q5VUB5 890 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 MTSS1LQ765P7 747 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 CEP57Q86XR8 500 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 BLIDQ8IZY5 108 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 ASAP3Q8TDY4 903 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 CCDC51Q96ER9 411 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 BORCS6Q96GS4 357 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 AIFM3Q96NN9 605 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 LXNQ9BS40 222 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 PHF20Q9BVI0 1012 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 SH3GLB2Q9NR46 395 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 HEBP1Q9NRV9 189 aa9.97□□□□□ -0.81
SRRM1-217ENST00000490543 DNMT3BQ9UBC3 853 aaKnown RBP9.97□□□□□ -0.81
SRRM1-217ENST00000490543 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.97□□□□□ -0.81
SRRM1-217ENST00000490543 ZFHX4Q86UP3 3567 aa9.96□□□□□ -0.81
SRRM1-217ENST00000490543 CASTOR2A6NHX0 329 aa9.96□□□□□ -0.82
SRRM1-217ENST00000490543 TBC1D4O60343 1298 aa9.96□□□□□ -0.82
SRRM1-217ENST00000490543 KIF4AO95239 1232 aa9.96□□□□□ -0.82
SRRM1-217ENST00000490543 NPTXRO95502 500 aa9.96□□□□□ -0.82
SRRM1-217ENST00000490543 TDGF1P13385 188 aa9.96□□□□□ -0.82
SRRM1-217ENST00000490543 PDIA3P30101 505 aaKnown RBP9.96□□□□□ -0.82
SRRM1-217ENST00000490543 RPS9P46781 194 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms