RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 MYO16Q9Y6X6 1858 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 FAM221BA6H8Z2 402 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 SLC27A2O14975 620 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 IGHDP01880 384 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 GBP1P32455 592 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 CLCNKBP51801 687 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 SCAPQ12770 1279 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 TWF1Q12792 350 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 MXD4Q14582 209 aaPredicted RBP15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 STXBP5Q5T5C0 1151 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 TTC22Q5TAA0 569 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 ELMOD1Q8N336 334 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 CAMKK1Q8N5S9 505 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 C3orf58Q8NDZ4 430 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 GLIS3Q8NEA6 775 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 ETNPPLQ8TBG4 499 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 CCDC12Q8WUD4 166 aaPredicted RBP15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 TMEM209Q96SK2 561 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 SLC32A1Q9H598 525 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 ASAH2Q9NR71 780 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 CACNA2D2Q9NY47 1150 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 PPME1Q9Y570 386 aa15.14■□□□□ 0.01
EXOSC3-207ENST00000490516 PLXNB3Q9ULL4 1909 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 KIAA1549LQ6ZVL6 1849 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 SHROOM3Q8TF72 1996 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 TMEM189-UBE2V1I3L0A0 370 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 TBX3O15119 743 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 MEFVO15553 781 aaPredicted RBP15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 ATG13O75143 517 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 RECQL4O94761 1208 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 YWHABP31946 246 aaKnown RBP15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 ADD1P35611 737 aaKnown RBP15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 EPHA5P54756 1037 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 TFDP1Q14186 410 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 XKR9Q5GH70 373 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 FSTL4Q6MZW2 842 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 ARID3BQ8IVW6 561 aaPredicted RBP15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 BICD2Q8TD16 824 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 TBCKQ8TEA7 893 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 LRIG1Q96JA1 1093 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 PI4KAP42356 2102 aa15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 TNRC6BQ9UPQ9 1833 aaKnown RBP15.13■□□□□ 0.01
EXOSC3-207ENST00000490516 A0A1W2PRU2 124 aa15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 PRB1P04280 392 aa15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 POU5F1BQ06416 359 aa15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 KARSQ15046 597 aaKnown RBP15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 ARHGAP29Q52LW3 1261 aa15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 GLRA4Q5JXX5 417 aa15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 GPR88Q9GZN0 384 aa15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 RWDD1Q9H446 243 aaPredicted RBP15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 GOLGA2P5Q9HBQ8 144 aa15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 TENM4Q6N022 2769 aa15.12■□□□□ 0.01
EXOSC3-207ENST00000490516 ACACAQ13085 2346 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 KLF18A0A0U1RQI7 1052 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 DKC1O60832 514 aaKnown RBP eCLIP15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 RNF40O75150 1001 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 P4HBP07237 508 aaKnown RBP15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 MAPK8P45983 427 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 FAM193AP78312 1265 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 TMEM196Q5HYL7 178 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 PMS2CLQ68D20 193 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 CYP2U1Q7Z449 544 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 HAUS6Q7Z4H7 955 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 PIP4P1Q86T03 277 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 LEMD2Q8NC56 503 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 LXNQ9BS40 222 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 SLKQ9H2G2 1235 aaPredicted RBP15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 VAV3Q9UKW4 847 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 ASXL3Q9C0F0 2248 aa15.11■□□□□ 0.01
EXOSC3-207ENST00000490516 CYP3A7-CYP3A51PA0A087WV96 503 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 CCDC194A0A1B0GVG4 234 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 DPYSL4O14531 572 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 TRAPPC3O43617 180 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 EGFP01133 1207 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 GLRA2P23416 452 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 CYP3A7P24462 503 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 PPP2R5CQ13362 524 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 UPP1Q16831 310 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 ITPRIPL2Q3MIP1 535 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 CREB3L3Q68CJ9 461 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 OTUD6AQ7L8S5 288 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 NOSTRINQ8IVI9 506 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 C4orf19Q8IY42 314 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 CHFRQ96EP1 664 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 LRRC3Q9BY71 257 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 NFKBIZQ9BYH8 718 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 PDZD7Q9H5P4 517 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 RGL1Q9NZL6 768 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 VPS54Q9P1Q0 977 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 FBXL5Q9UKA1 691 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 NAP1L2Q9ULW6 460 aaPredicted RBP15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 GDAQ9Y2T3 454 aa15.1■□□□□ 0.01
EXOSC3-207ENST00000490516 PTPRDP23468 1912 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 APC2O95996 2303 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 H0Y626 953 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 TRIM16O95361 564 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 BCKDHBP21953 392 aa15.09■□□□□ 0.01
EXOSC3-207ENST00000490516 ARL2P36404 184 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms