RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PUM1Q14671 1186 aaKnown RBP eCLIP17.35■□□□□ 0.37
PLOD3-216ENST00000489927 SEZ6Q53EL9 994 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 TPGS2Q68CL5 300 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 TSSK4Q6SA08 328 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 PDZD4Q76G19 769 aaPredicted RBP17.35■□□□□ 0.37
PLOD3-216ENST00000489927 ZBTB44Q8NCP5 570 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 ATRIPQ8WXE1 791 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 DNASE1L2Q92874 299 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 BORCS6Q96GS4 357 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 MMTAG2Q9BU76 263 aaKnown RBP17.35■□□□□ 0.37
PLOD3-216ENST00000489927 BRD9Q9H8M2 597 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 C17orf75Q9HAS0 396 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 ZFP14Q9HCL3 533 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 PPP4R2Q9NY27 417 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 ANKFY1Q9P2R3 1169 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 TUBGCP4Q9UGJ1 667 aa17.35■□□□□ 0.37
PLOD3-216ENST00000489927 ZNF197O14709 1029 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 TOM1L1O75674 476 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 MCM4P33991 863 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 ADCY1Q08828 1119 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 RAD51AP2Q09MP3 1159 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 SLC10A6Q3KNW5 377 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 CYP4A22Q5TCH4 519 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 ZNF280DQ6N043 979 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 HS6ST3Q8IZP7 471 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 ZNF687Q8N1G0 1237 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 TMEM130Q8N3G9 435 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 DDX12PQ92771 950 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 NELL1Q92832 810 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 ZSCAN31Q96LW9 406 aaPredicted RBP17.34■□□□□ 0.37
PLOD3-216ENST00000489927 ZSWIM3Q96MP5 696 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 TBC1D32Q96NH3 1257 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 ASB16Q96NS5 453 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 NTPCRQ9BSD7 190 aaKnown RBP17.34■□□□□ 0.37
PLOD3-216ENST00000489927 ZSCAN32Q9NX65 697 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 DLL3Q9NYJ7 618 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 CEP72Q9P209 647 aa17.34■□□□□ 0.37
PLOD3-216ENST00000489927 MRPS17Q9Y2R5 130 aaKnown RBP17.34■□□□□ 0.37
PLOD3-216ENST00000489927 LAD1O00515 517 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 MOSPD3O75425 235 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 GUCY2CP25092 1073 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 PRPHP41219 470 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 TWF1Q12792 350 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 STRN3Q13033 797 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 MTAPQ13126 283 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 NOLC1Q14978 699 aaKnown RBP eCLIP17.33■□□□□ 0.36
PLOD3-216ENST00000489927 ZRSR1Q15695 479 aaKnown RBP17.33■□□□□ 0.36
PLOD3-216ENST00000489927 IQCEQ6IPM2 695 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 DTHD1Q6ZMT9 781 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 ELMOD1Q8N336 334 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 TMEM161BQ8NDZ6 487 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 APPL2Q8NEU8 664 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 SPIRE2Q8WWL2 714 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 SMARCD2Q92925 531 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 ZNF512Q96ME7 567 aaPredicted RBP17.33■□□□□ 0.36
PLOD3-216ENST00000489927 TRMT61BQ9BVS5 477 aaKnown RBP17.33■□□□□ 0.36
PLOD3-216ENST00000489927 TIPINQ9BVW5 301 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 PRMT8Q9NR22 394 aaPredicted RBP17.33■□□□□ 0.36
PLOD3-216ENST00000489927 SH2B1Q9NRF2 756 aaPredicted RBP17.33■□□□□ 0.36
PLOD3-216ENST00000489927 NCDNQ9UBB6 729 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 AFF4Q9UHB7 1163 aaKnown RBP17.33■□□□□ 0.36
PLOD3-216ENST00000489927 NDRG2Q9UN36 371 aaKnown RBP17.33■□□□□ 0.36
PLOD3-216ENST00000489927 GPR179Q6PRD1 2367 aa17.33■□□□□ 0.36
PLOD3-216ENST00000489927 LILRB5O75023 590 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 PLS3P13797 630 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 CPB1P15086 417 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 SPAG1Q07617 926 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 VITQ6UXI7 678 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 RNF19BQ6ZMZ0 732 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 MAP4K3Q8IVH8 894 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 IRF7Q92985 503 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 EPC1Q9H2F5 836 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 ZNF334Q9HCZ1 680 aaPredicted RBP17.32■□□□□ 0.36
PLOD3-216ENST00000489927 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.32■□□□□ 0.36
PLOD3-216ENST00000489927 MAFFQ9ULX9 164 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 PCDHB8Q9UN66 801 aa17.32■□□□□ 0.36
PLOD3-216ENST00000489927 SMG5Q9UPR3 1016 aaKnown RBP17.32■□□□□ 0.36
PLOD3-216ENST00000489927 MAN2B1O00754 1011 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 CXCL8P10145 99 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 MAPTP10636 758 aaKnown RBP17.31■□□□□ 0.36
PLOD3-216ENST00000489927 MYL4P12829 197 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 GJA1P17302 382 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 PSMC3P17980 439 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 MARCKSP29966 332 aaPredicted RBP17.31■□□□□ 0.36
PLOD3-216ENST00000489927 GDI1P31150 447 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 VIPR2P41587 438 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 SMTNP53814 917 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 EPHA5P54756 1037 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 MCL1Q07820 350 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 RSPO4Q2I0M5 234 aaPredicted RBP17.31■□□□□ 0.36
PLOD3-216ENST00000489927 ZPBP2Q6X784 338 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 KIF2CQ99661 725 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 HAPLN2Q9GZV7 340 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 ASAH2Q9NR71 780 aa17.31■□□□□ 0.36
PLOD3-216ENST00000489927 TIMM13Q9Y5L4 95 aaPredicted RBP17.31■□□□□ 0.36
PLOD3-216ENST00000489927 COL4A2P08572 1712 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 NCANO14594 1321 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 M0QZQ0 153 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 CLDN3O15551 220 aa17.3■□□□□ 0.36
PLOD3-216ENST00000489927 YWHAHQ04917 246 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms