RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
SRSF4-204ENST00000489898 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
SRSF4-204ENST00000489898 MFSD14AQ96MC6 490 aa12.9□□□□□ -0.34
SRSF4-204ENST00000489898 ACAP3Q96P50 834 aa12.9□□□□□ -0.34
SRSF4-204ENST00000489898 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
SRSF4-204ENST00000489898 LARSQ9P2J5 1176 aaKnown RBP12.9□□□□□ -0.34
SRSF4-204ENST00000489898 DNMT3BQ9UBC3 853 aaKnown RBP12.9□□□□□ -0.34
SRSF4-204ENST00000489898 STK17AQ9UEE5 414 aa12.9□□□□□ -0.34
SRSF4-204ENST00000489898 FBXL5Q9UKA1 691 aa12.9□□□□□ -0.34
SRSF4-204ENST00000489898 OTOGLQ3ZCN5 2332 aa12.9□□□□□ -0.34
SRSF4-204ENST00000489898 ANO9A1A5B4 782 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 LACTBL1A8MY62 500 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
SRSF4-204ENST00000489898 SYN3O14994 580 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 OGTO15294 1046 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 CCL16O15467 120 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 PI15O43692 258 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 STX6O43752 255 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 TRAK2O60296 914 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 HNRNPA1P09651 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
SRSF4-204ENST00000489898 HOXD13P35453 343 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 TDGQ13569 410 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 DHX8Q14562 1220 aaKnown RBP12.89□□□□□ -0.35
SRSF4-204ENST00000489898 TMEM132AQ24JP5 1023 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 AXDND1Q5T1B0 1012 aaPredicted RBP12.89□□□□□ -0.35
SRSF4-204ENST00000489898 GRASPQ7Z6J2 395 aaPredicted RBP12.89□□□□□ -0.35
SRSF4-204ENST00000489898 CEP57Q86XR8 500 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 LINC00301Q8NCQ3 95 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 DDX12PQ92771 950 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 LRRC3Q9BY71 257 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 DLGAP2Q9P1A6 1054 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 NUMBLQ9Y6R0 609 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 CACNA1AO00555 2505 aa12.89□□□□□ -0.35
SRSF4-204ENST00000489898 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 CLDN3O15551 220 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 CLTAP09496 248 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 PDCP20941 246 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 RPL9P32969 192 aaKnown RBP12.88□□□□□ -0.35
SRSF4-204ENST00000489898 DDIT3P35638 169 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 YARSP54577 528 aaKnown RBP12.88□□□□□ -0.35
SRSF4-204ENST00000489898 EHHADHQ08426 723 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 PARM1Q6UWI2 310 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 ANKS3Q6ZW76 656 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 ZNF720Q7Z2F6 126 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 SLC44A3Q8N4M1 653 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 TTC9BQ8N6N2 239 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 FGF13Q92913 245 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 CALML4Q96GE6 196 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 BORCS6Q96GS4 357 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 DNAJC25Q9H1X3 360 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 PLEKHA5Q9HAU0 1116 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 AVENQ9NQS1 362 aaPredicted RBP12.88□□□□□ -0.35
SRSF4-204ENST00000489898 OLFML3Q9NRN5 406 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 SLC38A7Q9NVC3 462 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 FAM186AA6NE01 2351 aa12.88□□□□□ -0.35
SRSF4-204ENST00000489898 F5P12259 2224 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 PIRO00625 290 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 FAM13AO94988 1023 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 ATF2P15336 505 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 CEBPBP17676 345 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 CYP3A5P20815 502 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 EPHA5P54756 1037 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 STRN3Q13033 797 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 JADE1Q6IE81 842 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 PDXDC1Q6P996 788 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 SHC4Q6S5L8 630 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 TMC8Q8IU68 726 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 TCEAL8Q8IYN2 117 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 MYCT1Q8N699 235 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 OR10T2Q8NGX3 314 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 TMEM209Q96SK2 561 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 MKNK1Q9BUB5 465 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 GZF1Q9H116 711 aaPredicted RBP12.87□□□□□ -0.35
SRSF4-204ENST00000489898 IGSF9Q9P2J2 1179 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 INSL5Q9Y5Q6 135 aa12.87□□□□□ -0.35
SRSF4-204ENST00000489898 RIF1Q5UIP0 2472 aaKnown RBP12.87□□□□□ -0.35
SRSF4-204ENST00000489898 OAZ2O95190 189 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 OR4Q2P0C623 313 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 SRFP11831 508 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 GLULP15104 373 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 AOC1P19801 751 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 FSHRP23945 695 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 LIG4P49917 911 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 SMTNP53814 917 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 CEBPZQ03701 1054 aaKnown RBP12.86□□□□□ -0.35
SRSF4-204ENST00000489898 PPM1LQ5SGD2 360 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 DYMQ7RTS9 669 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 APBB1IPQ7Z5R6 666 aaPredicted RBP12.86□□□□□ -0.35
SRSF4-204ENST00000489898 HPS3Q969F9 1004 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 ACSF2Q96CM8 615 aaPredicted RBP12.86□□□□□ -0.35
SRSF4-204ENST00000489898 HVCN1Q96D96 273 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 TCEAL4Q96EI5 215 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 KIF12Q96FN5 646 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 CHAMP1Q96JM3 812 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 DDX23Q9BUQ8 820 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms