RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	EHHADH	Q08426	723 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	SPATA1	Q5VX52	437 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	ARMCX5	Q6P1M9	558 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	TMC5	Q6UXY8	1006 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	SPATA31D4	Q6ZUB0	917 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	EPM2AIP1	Q7L775	607 aa	Predicted RBP	12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	GRAMD1C	Q8IYS0	662 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	FSIP1	Q8NA03	581 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	GLIS3	Q8NEA6	775 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	APPL2	Q8NEU8	664 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	ZNF507	Q8TCN5	953 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	SAAL1	Q96ER3	474 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	CCDC34	Q96HJ3	373 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	RPGRIP1	Q96KN7	1286 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	CBWD1	Q9BRT8	395 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	MTRR	Q9UBK8	725 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772	BACE2	Q9Y5Z0	518 aa		12.03	□□□□□ -0.48
GGA1-222	ENST00000489772		H7C4K7	107 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	EXTL3	O43909	919 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	PAX3	P23760	479 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	OR1D2	P34982	312 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	VARS2	Q5ST30	1063 aa	Known RBP	12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	KANK3	Q6NY19	840 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	LILRA6	Q6PI73	481 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	CYP26C1	Q6V0L0	522 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	C15orf39	Q6ZRI6	1047 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	GPR149	Q86SP6	731 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	NT5DC4	Q86YG4	428 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	KREMEN2	Q8NCW0	462 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	CMAS	Q8NFW8	434 aa	Predicted RBP	12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	NOC3L	Q8WTT2	800 aa	Known RBP	12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	SCFD1	Q8WVM8	642 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	SUSD3	Q96L08	255 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	PCIF1	Q9H4Z3	704 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	SLC39A2	Q9NP94	309 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	EXOC1	Q9NV70	894 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	RBAK	Q9NYW8	714 aa	Predicted RBP	12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	NR2E1	Q9Y466	385 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	CDY1	Q9Y6F8	540 aa		12.02	□□□□□ -0.49
GGA1-222	ENST00000489772	MYH15	Q9Y2K3	1946 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	CCDC195	A0A1B0GUA6	201 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	GOLGA8IP	A6NC78	632 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	GOLGA8J	A6NMD2	632 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	LOC730098	B7Z3J9	87 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	WEE2	P0C1S8	567 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	ALAD	P13716	330 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	HOXD13	P35453	343 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	GUCY2F	P51841	1108 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	SNRPF	P62306	86 aa	Known RBP	12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	PSMD2	Q13200	908 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	RAB33A	Q14088	237 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	BMT2	Q1RMZ1	405 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	LIN9	Q5TKA1	542 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	C9orf57	Q5W0N0	161 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	DSTYK	Q6XUX3	929 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	HS2ST1	Q7LGA3	356 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	BRSK2	Q8IWQ3	736 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	GPD1L	Q8N335	351 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	KIAA1586	Q9HCI6	787 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	TSHZ2	Q9NRE2	1034 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	AGPAT3	Q9NRZ7	376 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	ZDHHC7	Q9NXF8	308 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	CDH22	Q9UJ99	828 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	PCDHB8	Q9UN66	801 aa		12.01	□□□□□ -0.49
GGA1-222	ENST00000489772	TDRD15	B5MCY1	1934 aa	Known RBP	12	□□□□□ -0.49
GGA1-222	ENST00000489772	ZNF233	A6NK53	670 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772		M0QZQ0	153 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	ADAM12	O43184	909 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	KLRC4	O43908	158 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	RFPL2	O75678	378 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	ZNF202	O95125	648 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	RPN1	P04843	607 aa	Known RBP	12	□□□□□ -0.49
GGA1-222	ENST00000489772	LILRA4	P59901	499 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	TFAM	Q00059	246 aa	Known RBP	12	□□□□□ -0.49
GGA1-222	ENST00000489772	KNOP1	Q1ED39	458 aa	Known RBP	12	□□□□□ -0.49
GGA1-222	ENST00000489772	KMT5B	Q4FZB7	885 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	SLC8B1	Q6J4K2	584 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	KRBA2	Q6ZNG9	492 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	USP37	Q86T82	979 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	NELFCD	Q8IXH7	590 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	TMEM130	Q8N3G9	435 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	GOLGA5	Q8TBA6	731 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	CACTIN	Q8WUQ7	758 aa	Known RBP	12	□□□□□ -0.49
GGA1-222	ENST00000489772	CCDC47	Q96A33	483 aa	Known RBP	12	□□□□□ -0.49
GGA1-222	ENST00000489772	RHOBTB2	Q9BYZ6	727 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	GOLPH3L	Q9H4A5	285 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	POMK	Q9H5K3	350 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	PIDD1	Q9HB75	910 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	DPP3	Q9NY33	737 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	HSPBP1	Q9NZL4	362 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	CGN	Q9P2M7	1197 aa	Known RBP	12	□□□□□ -0.49
GGA1-222	ENST00000489772	FBXW11	Q9UKB1	542 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	CIZ1	Q9ULV3	898 aa	Predicted RBP	12	□□□□□ -0.49
GGA1-222	ENST00000489772	MYH11	P35749	1972 aa		12	□□□□□ -0.49
GGA1-222	ENST00000489772	TCF20	Q9UGU0	1960 aa	Known RBP	11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	C5orf42	Q9H799	3197 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	ANO9	A1A5B4	782 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	ARHGEF37	A1IGU5	675 aa		11.99	□□□□□ -0.49
GGA1-222	ENST00000489772	PI4K2B	G5E9Z4	385 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms