RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SMIM28A0A1B0GU29 152 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 TULP1O00294 542 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-205ENST00000489656 INPPL1O15357 1258 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 NBNO60934 754 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 CXCL10P02778 98 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 ITGB3P05106 788 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 ATF7P17544 494 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-205ENST00000489656 MYL6P60660 151 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 FAM189BP81408 668 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 CUL2Q13617 745 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 RAD9BQ6WBX8 426 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 ZNF598Q86UK7 904 aaKnown RBP15.22■□□□□ 0.03
VPS26A-205ENST00000489656 FAM71AQ8IYT1 594 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 PGBD4Q96DM1 585 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 APOL6Q9BWW8 343 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 CXCL16Q9H2A7 254 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-205ENST00000489656 HIPK3Q9H422 1215 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 FAM124BQ9H5Z6 455 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-205ENST00000489656 NHEJ1Q9H9Q4 299 aaPredicted RBP15.22■□□□□ 0.03
VPS26A-205ENST00000489656 UBN1Q9NPG3 1134 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 NUB1Q9Y5A7 615 aa15.22■□□□□ 0.03
VPS26A-205ENST00000489656 C9IYK1 514 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 FOXN3O00409 490 aaPredicted RBP15.21■□□□□ 0.03
VPS26A-205ENST00000489656 EVI5O60447 810 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 LCA5LO95447 670 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 EOMESO95936 686 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 CYLC1P35663 651 aaPredicted RBP15.21■□□□□ 0.03
VPS26A-205ENST00000489656 RBP5P82980 135 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 ARHGAP44Q17R89 818 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 ASTE1Q2TB18 679 aaPredicted RBP15.21■□□□□ 0.03
VPS26A-205ENST00000489656 ZNF699Q32M78 642 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 SCARA3Q6AZY7 606 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 SPOPLQ6IQ16 392 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 AGMOQ6ZNB7 445 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 SLC24A5Q71RS6 500 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 RTN4RL1Q86UN2 441 aaPredicted RBP15.21■□□□□ 0.03
VPS26A-205ENST00000489656 ECHDC2Q86YB7 292 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 LRRC52Q8N7C0 313 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 UBR7Q8N806 425 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 LINC01599Q8WXQ3 324 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 KAT5Q92993 513 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 PPP1R10Q96QC0 940 aaKnown RBP15.21■□□□□ 0.03
VPS26A-205ENST00000489656 NIF3L1Q9GZT8 377 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 WNT8AQ9H1J5 351 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 SLC38A7Q9NVC3 462 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 CNTN6Q9UQ52 1028 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 EPN1Q9Y6I3 576 aaPredicted RBP15.21■□□□□ 0.03
VPS26A-205ENST00000489656 MYH10P35580 1976 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 TSC2P49815 1807 aa15.21■□□□□ 0.03
VPS26A-205ENST00000489656 UMODL1Q5DID0 1318 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 ANO9A1A5B4 782 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 EIF3CLB5ME19 914 aaKnown RBP15.2■□□□□ 0.02
VPS26A-205ENST00000489656 PTGESO14684 152 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 CCP110O43303 1012 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 ZNF500O60304 480 aaPredicted RBP15.2■□□□□ 0.02
VPS26A-205ENST00000489656 GFPT2O94808 682 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 NDUFA10O95299 355 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 PLEKP08567 350 aaPredicted RBP15.2■□□□□ 0.02
VPS26A-205ENST00000489656 CLTBP09497 229 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 POLR2BP30876 1174 aaKnown RBP15.2■□□□□ 0.02
VPS26A-205ENST00000489656 RFC2P35250 354 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 EIF4A3P38919 411 aaKnown RBP15.2■□□□□ 0.02
VPS26A-205ENST00000489656 KLHL30Q0D2K2 578 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 MTF1Q14872 753 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 LRRC26Q2I0M4 334 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 UBE2Q1Q7Z7E8 422 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 GSTCDQ8NEC7 633 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 SEPT8Q92599 483 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 CCDC42Q96M95 316 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 EIF3CQ99613 913 aaKnown RBP15.2■□□□□ 0.02
VPS26A-205ENST00000489656 SYT11Q9BT88 431 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 BCO2Q9BYV7 579 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 RSAD1Q9HA92 442 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 KLK14Q9P0G3 267 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 ATP11BQ9Y2G3 1177 aa15.2■□□□□ 0.02
VPS26A-205ENST00000489656 PTPRSQ13332 1948 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 ARL5CA6NH57 179 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 MEIS3P2A8K0S8 358 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 RBAK-RBAKDNI3L0D1 243 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 PIRO00625 290 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 KRT19P08727 400 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 ACO1P21399 889 aaKnown RBP15.19■□□□□ 0.02
VPS26A-205ENST00000489656 LRPAP1P30533 357 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 YWHAEP62258 255 aaKnown RBP15.19■□□□□ 0.02
VPS26A-205ENST00000489656 NAB2Q15742 525 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 TDRD12Q587J7 1177 aaKnown RBP15.19■□□□□ 0.02
VPS26A-205ENST00000489656 ZNF667Q5HYK9 610 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 GLRA4Q5JXX5 417 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 C9orf57Q5W0N0 161 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 TOGARAM2Q6ZUX3 1019 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 CCAR2Q8N163 923 aaKnown RBP15.19■□□□□ 0.02
VPS26A-205ENST00000489656 LPPQ93052 612 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 C18orf25Q96B23 403 aaPredicted RBP15.19■□□□□ 0.02
VPS26A-205ENST00000489656 HPDLQ96IR7 371 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 RPS6KC1Q96S38 1066 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 HAUS4Q9H6D7 363 aa15.19■□□□□ 0.02
VPS26A-205ENST00000489656 ELAC1Q9H777 363 aaKnown RBP15.19■□□□□ 0.02
VPS26A-205ENST00000489656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.19■□□□□ 0.029e-9■■■■■ 107.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms