RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 DDHD2O94830 711 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 VNN1O95497 513 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 LAG3P18627 525 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 GUCY2FP51841 1108 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 WDR44Q5JSH3 913 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 TMCO2Q7Z6W1 182 aaPredicted RBP14.95□□□□□ -0.02
C9orf3-221ENST00000489562 ZNF280BQ86YH2 543 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 EHBP1Q8NDI1 1231 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 CXorf38Q8TB03 319 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 FAXDC2Q96IV6 333 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 FAM81BQ96LP2 452 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 NRDE2Q9H7Z3 1164 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 VRTNQ9H8Y1 702 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 GOLGA2P5Q9HBQ8 144 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 AAASQ9NRG9 546 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 AGAP1Q9UPQ3 857 aa14.95□□□□□ -0.02
C9orf3-221ENST00000489562 CASTOR2A6NHX0 329 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 ASS1P00966 412 aaKnown RBP14.94□□□□□ -0.02
C9orf3-221ENST00000489562 ALDH2P05091 517 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 TAF6P49848 677 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 UPP1Q16831 310 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 ZNF699Q32M78 642 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 SV2CQ496J9 727 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 TRIM65Q6PJ69 517 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 DCLRE1AQ6PJP8 1040 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 TDHQ8IZJ6 230 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 FIBCD1Q8N539 461 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 LMO3Q8TAP4 145 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 IQCDQ96DY2 449 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 MRFAP1L1Q96HT8 127 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 HPDLQ96IR7 371 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 FAM84AQ96KN4 292 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 NT5C1BQ96P26 610 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 CRACR2AQ9BSW2 395 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 COLEC11Q9BWP8 271 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 INTS2Q9H0H0 1204 aaKnown RBP14.94□□□□□ -0.02
C9orf3-221ENST00000489562 CWH43Q9H720 699 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 PLCB1Q9NQ66 1216 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 RWDD3Q9Y3V2 267 aa14.94□□□□□ -0.02
C9orf3-221ENST00000489562 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-221ENST00000489562 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-221ENST00000489562 ARHGEF37A1IGU5 675 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 TEX33O43247 280 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 CST3P01034 146 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-221ENST00000489562 P4HA1P13674 534 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 RFX1P22670 979 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 PON1P27169 355 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 PPM1AP35813 382 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 OR1G1P47890 313 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 ALDH7A1P49419 539 aaKnown RBP14.93□□□□□ -0.02
C9orf3-221ENST00000489562 CLCNKBP51801 687 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 ZNF75DP51815 510 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 MYL6P60660 151 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 NOP14P78316 857 aaKnown RBP14.93□□□□□ -0.02
C9orf3-221ENST00000489562 SYCP1Q15431 976 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 ZNF667Q5HYK9 610 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 SPOUT1Q5T280 376 aaKnown RBP14.93□□□□□ -0.02
C9orf3-221ENST00000489562 SMYD5Q6GMV2 418 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 SEMA4DQ92854 862 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 ZNF558Q96NG5 402 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 XYLT2Q9H1B5 865 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 DNAJB4Q9UDY4 337 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 SIK3Q9Y2K2 1263 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 FAN1Q9Y2M0 1017 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 NUB1Q9Y5A7 615 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 PCDHA11Q9Y5I1 949 aa14.93□□□□□ -0.02
C9orf3-221ENST00000489562 MRPL42Q9Y6G3 142 aaKnown RBP14.93□□□□□ -0.02
C9orf3-221ENST00000489562 ITIH6Q6UXX5 1313 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 TNRC18O15417 2968 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-221ENST00000489562 NRP1O14786 923 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 AP5Z1O43299 807 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 TRAPPC3O43617 180 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 B4GALT3O60512 393 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 B3GAT3O94766 335 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 CLSTN1O94985 981 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 GALTP07902 379 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 TBXAS1P24557 533 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-221ENST00000489562 PBX1P40424 430 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 SLC11A1P49279 550 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 BCAR1P56945 870 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 LILRA4P59901 499 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 TNNC1P63316 161 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 KCNMA1Q12791 1236 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 ELAVL2Q12926 359 aaKnown RBP14.92□□□□□ -0.02
C9orf3-221ENST00000489562 RAB30Q15771 203 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 CLP1Q92989 425 aaKnown RBP14.92□□□□□ -0.02
C9orf3-221ENST00000489562 PCMTD1Q96MG8 357 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-221ENST00000489562 NUP58Q9BVL2 599 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 FAM124BQ9H5Z6 455 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-221ENST00000489562 GDAP2Q9NXN4 497 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 STK39Q9UEW8 545 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 FBXL5Q9UKA1 691 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 TSC2P49815 1807 aa14.92□□□□□ -0.02
C9orf3-221ENST00000489562 A0A1W2PPC1 479 aa14.91□□□□□ -0.02
C9orf3-221ENST00000489562 KPNA7A9QM74 516 aa14.91□□□□□ -0.02
C9orf3-221ENST00000489562 KIF4AO95239 1232 aa14.91□□□□□ -0.02
C9orf3-221ENST00000489562 SLC9A1P19634 815 aa14.91□□□□□ -0.02
C9orf3-221ENST00000489562 AARSP49588 968 aaKnown RBP eCLIP14.91□□□□□ -0.02
C9orf3-221ENST00000489562 GCNT1Q02742 428 aa14.91□□□□□ -0.02
C9orf3-221ENST00000489562 TRIM14Q14142 442 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms