RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 PTENP60484 403 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 TNNC1P63316 161 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 AMPD2Q01433 879 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 CYP27A1Q02318 531 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 ARID5AQ03989 594 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 GFPT1Q06210 699 aaPredicted RBP6.83□□□□□ -1.32
SF3A3-208ENST00000489537 ARHGAP1Q07960 439 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 LAMTOR4Q0VGL1 99 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 BIRC3Q13489 604 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 TRPC3Q13507 836 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 PRPF4BQ13523 1007 aaKnown RBP6.83□□□□□ -1.32
SF3A3-208ENST00000489537 ACVR2BQ13705 512 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 ARHGEF6Q15052 776 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 RPS6KA1Q15418 735 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 SKIV2LQ15477 1246 aaKnown RBP6.83□□□□□ -1.32
SF3A3-208ENST00000489537 DUOXA2Q1HG44 320 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 DCAF4L1Q3SXM0 396 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 CBWD6Q4V339 395 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 CBWD3Q5JTY5 395 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 CBWD5Q5RIA9 395 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 C6orf118Q5T5N4 469 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 LIN9Q5TKA1 542 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 DPY19L2P1Q6NXN4 242 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 MPZL3Q6UWV2 235 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 SV2AQ7L0J3 742 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 RSRC2Q7L4I2 434 aaKnown RBP6.83□□□□□ -1.32
SF3A3-208ENST00000489537 BRSK2Q8IWQ3 736 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 CCDC116Q8IYX3 515 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 PPM1KQ8N3J5 372 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 NME8Q8N427 588 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 UBL4BQ8N7F7 174 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 GOLGA6L1Q8N7Z2 621 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 EIF1ADQ8N9N8 165 aaKnown RBP6.83□□□□□ -1.32
SF3A3-208ENST00000489537 LMO3Q8TAP4 145 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 SHC3Q92529 594 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 TMEM143Q96AN5 459 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 CCDC127Q96BQ5 260 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 ANKRD36BP1Q96IX9 119 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 VCPIP1Q96JH7 1222 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 MAML3Q96JK9 1138 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 RUNDC3BQ96NL0 473 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 CEP89Q96ST8 783 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 PCYT2Q99447 389 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 AGPAT1Q99943 283 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 FAM213AQ9BRX8 229 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 C1QTNF2Q9BXJ5 285 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 KLF16Q9BXK1 252 aaPredicted RBP6.83□□□□□ -1.32
SF3A3-208ENST00000489537 ZNF518BQ9C0D4 1074 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 TMEM117Q9H0C3 514 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 FZD8Q9H461 694 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 TUT1Q9H6E5 874 aaKnown RBP6.83□□□□□ -1.32
SF3A3-208ENST00000489537 ZFAND3Q9H8U3 227 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 SUGCTQ9HAC7 445 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 UVRAGQ9P2Y5 699 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 AMFRQ9UKV5 643 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 CEP83Q9Y592 693 aa6.83□□□□□ -1.32
SF3A3-208ENST00000489537 COL11A1P12107 1806 aaPredicted RBP6.83□□□□□ -1.32
SF3A3-208ENST00000489537 NCANO14594 1321 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 CEP290O15078 2479 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 GOLGA6L10A0A0M3HER8 536 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 LRRIQ3A6PVS8 624 aaPredicted RBP6.82□□□□□ -1.32
SF3A3-208ENST00000489537 MED7O43513 233 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 B4GALT4O60513 344 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ERLIN2O94905 339 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 KIF4AO95239 1232 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 CLTAP09496 248 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 TMEM191BP0C7N4 346 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 TRIM49P0CI25 452 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 TRIM49CP0CI26 452 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 DLATP10515 647 aaKnown RBP6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ACTN1P12814 892 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 DESP17661 470 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ATP4AP20648 1035 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 PAX3P23760 479 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ATICP31939 592 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 GBP1P32455 592 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 CETN2P41208 172 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 GRM5P41594 1212 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 PIK3CAP42336 1068 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 SLC1A1P43005 524 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 PSMC4P43686 418 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 GPC5P78333 572 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 CDR2Q01850 454 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 TAP1Q03518 808 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 PRKCZQ05513 592 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 PPP3CAQ08209 521 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 CAPSQ13938 189 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 HSDL1Q3SXM5 330 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ATF7IP2Q5U623 682 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 PHLDB3Q6NSJ2 640 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 C11orf63Q6NUN7 778 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 EFCAB12Q6NXP0 572 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 TAPT1Q6NXT6 567 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 WDR93Q6P2C0 686 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 C15orf39Q6ZRI6 1047 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 EEPD1Q7L9B9 569 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ZNF571Q7Z3V5 609 aaPredicted RBP6.82□□□□□ -1.32
SF3A3-208ENST00000489537 ZBTB33Q86T24 672 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 RSPH3Q86UC2 560 aa6.82□□□□□ -1.32
SF3A3-208ENST00000489537 CBWD2Q8IUF1 395 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms