RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RPS6KC1Q96S38 1066 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.09□□□□□ -0.957e-9■■□□□ 12.4
VTI1A-207ENST00000489357 TMEM117Q9H0C3 514 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.09□□□□□ -0.95
VTI1A-207ENST00000489357 RNF208Q9H0X6 261 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 EPC1Q9H2F5 836 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 ABHD16BQ9H3Z7 469 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 LCMT1Q9UIC8 334 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 AMFRQ9UKV5 643 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 STXBP5LQ9Y2K9 1186 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 GPSM3Q9Y4H4 160 aa9.09□□□□□ -0.95
VTI1A-207ENST00000489357 ALPK3Q96L96 1907 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 A6NJR5 290 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 SEPT4O43236 478 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 GGPS1O95749 300 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 MYBL1P10243 752 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 GBP1P32455 592 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 ARL2P36404 184 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 GCLMP48507 274 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 LIG4P49917 911 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 POU5F1Q01860 360 aaKnown RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 PAK2Q13177 524 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 CUL1Q13616 776 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 ACVR2BQ13705 512 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 MXD4Q14582 209 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 SURF1Q15526 300 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 TARBP2Q15633 366 aaKnown RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 ALS2CLQ60I27 953 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 PLPPR4Q7Z2D5 763 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 NT5DC3Q86UY8 548 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 GLYCTKQ8IVS8 523 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 KSR1Q8IVT5 923 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 EFCAB13Q8IY85 973 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 MREGQ8N565 214 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 C1orf131Q8NDD1 294 aaKnown RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 LNX1Q8TBB1 728 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 U2AF1L4Q8WU68 220 aaKnown RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 SCFD2Q8WU76 684 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 PSPC1Q8WXF1 523 aaKnown RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 SEPT1Q8WYJ6 367 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 FOXJ1Q92949 421 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 FAXDC2Q96IV6 333 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 RUNDC3BQ96NL0 473 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 ARHGAP9Q9BRR9 750 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 PLVAPQ9BX97 442 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 PACSIN1Q9BY11 444 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 FAM129AQ9BZQ8 928 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 POLR3FQ9H1D9 316 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 BCAS3Q9H6U6 928 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 UBE2TQ9NPD8 197 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 GPRC5CQ9NQ84 441 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 XPNPEP1Q9NQW7 623 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 GDF3Q9NR23 364 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 RAB20Q9NX57 234 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 UVRAGQ9P2Y5 699 aa9.08□□□□□ -0.96
VTI1A-207ENST00000489357 AJAP1Q9UKB5 411 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-207ENST00000489357 GOLGA6L10A0A0M3HER8 536 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 LRRIQ3A6PVS8 624 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 FOXN3O00409 490 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 KCNK3O14649 394 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 ADCY6O43306 1168 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 MSCO60682 206 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 MAFO75444 373 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 LGR5O75473 907 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 FARP2O94887 1054 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 FTCDO95954 541 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 ADRB2P07550 413 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 TBXAS1P24557 533 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 OAS2P29728 719 aaKnown RBP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 PDE6CP51160 858 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 GPC5P78333 572 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 DLG4P78352 724 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 CDR2Q01850 454 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 POU5F1BQ06416 359 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 C2orf54Q08AI8 447 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 SPDYCQ5MJ68 293 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 GJB7Q6PEY0 223 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 TRIM72Q6ZMU5 477 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 MAEAQ7L5Y9 396 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 MAATS1Q7Z4T9 603 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 DAAM2Q86T65 1068 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 CBWD2Q8IUF1 395 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 UBL4BQ8N7F7 174 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 CCDC26Q8TAB7 109 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 DEPTORQ8TB45 409 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 SLC35G2Q8TBE7 412 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 CEP89Q96ST8 783 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 LRRC1Q9BTT6 524 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 C2orf40Q9H1Z8 148 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 PCIF1Q9H4Z3 704 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 AZI2Q9H6S1 392 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 POLD4Q9HCU8 107 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 VTA1Q9NP79 307 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 C1orf112Q9NSG2 853 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 RBM12Q9NTZ6 932 aaKnown RBP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 DDX20Q9UHI6 824 aaKnown RBP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 NOCTQ9UK39 431 aaKnown RBP9.07□□□□□ -0.96
VTI1A-207ENST00000489357 GTF3C4Q9UKN8 822 aa9.07□□□□□ -0.96
VTI1A-207ENST00000489357 GNEQ9Y223 722 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms