RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 SPRED2Q7Z698 418 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 FILIP1Q7Z7B0 1213 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 MRPL43Q8N983 215 aaKnown RBP13.45□□□□□ -0.26
COL4A5-206ENST00000489230 GDPD5Q8WTR4 605 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 CCDC127Q96BQ5 260 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 TCF25Q9BQ70 676 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 METTL14Q9HCE5 456 aaKnown RBP13.45□□□□□ -0.26
COL4A5-206ENST00000489230 ENTPD7Q9NQZ7 604 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL4A5-206ENST00000489230 MRPL17Q9NRX2 175 aaKnown RBP13.45□□□□□ -0.26
COL4A5-206ENST00000489230 INTS13Q9NVM9 706 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 RWDD2AQ9UIY3 292 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 ITGA11Q9UKX5 1188 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 IRAK3Q9Y616 596 aa13.45□□□□□ -0.26
COL4A5-206ENST00000489230 FAM86C2PA6NEL3 165 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 PIRO00625 290 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 SLC16A3O15427 465 aaKnown RBP13.44□□□□□ -0.26
COL4A5-206ENST00000489230 B4GALT3O60512 393 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 C1RP00736 705 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 NFICP08651 508 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 DLATP10515 647 aaKnown RBP13.44□□□□□ -0.26
COL4A5-206ENST00000489230 CTSAP10619 480 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 MCCD1P59942 119 aaPredicted RBP13.44□□□□□ -0.26
COL4A5-206ENST00000489230 ERVFC1P60507 584 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 CLDN10P78369 228 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 SOX4Q06945 474 aaPredicted RBP13.44□□□□□ -0.26
COL4A5-206ENST00000489230 MYO1EQ12965 1108 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 C9orf57Q5W0N0 161 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 FUT10Q6P4F1 479 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 FAM186BQ8IYM0 893 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 CSGALNACT2Q8N6G5 542 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 ZSWIM2Q8NEG5 633 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 APPL2Q8NEU8 664 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 PARD3BQ8TEW8 1205 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 CDCA3Q99618 268 aaPredicted RBP13.44□□□□□ -0.26
COL4A5-206ENST00000489230 CGRRF1Q99675 332 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 TTPALQ9BTX7 342 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 EMILIN2Q9BXX0 1053 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 OXCT2Q9BYC2 517 aaPredicted RBP13.44□□□□□ -0.26
COL4A5-206ENST00000489230 NSUN3Q9H649 340 aaKnown RBP13.44□□□□□ -0.26
COL4A5-206ENST00000489230 CHST7Q9NS84 486 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 MARCH5Q9NX47 278 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 RALGAPA2Q2PPJ7 1873 aa13.44□□□□□ -0.26
COL4A5-206ENST00000489230 ANO9A1A5B4 782 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 FSCN2O14926 492 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 SYN3O14994 580 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 TRANK1O15050 2925 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 PHACTR2O75167 634 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 AKAP3O75969 853 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 KIF4AO95239 1232 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 EFEMP2O95967 443 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 URODP06132 367 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 PRKCSHP14314 528 aaPredicted RBP13.43□□□□□ -0.26
COL4A5-206ENST00000489230 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
COL4A5-206ENST00000489230 DNAJB1P25685 340 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 GTF2H1P32780 548 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 GLUD2P49448 558 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 VAMP7P51809 220 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 LILRA4P59901 499 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 DSG1Q02413 1049 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 CAMK1Q14012 370 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 FAM171A1Q5VUB5 890 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.43□□□□□ -0.26
COL4A5-206ENST00000489230 FRMD5Q7Z6J6 570 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 PPFIBP1Q86W92 1011 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 TMEM173Q86WV6 379 aaPredicted RBP13.43□□□□□ -0.26
COL4A5-206ENST00000489230 ZC3H3Q8IXZ2 948 aaKnown RBP13.43□□□□□ -0.26
COL4A5-206ENST00000489230 LRRC52Q8N7C0 313 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 ZNF560Q96MR9 790 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 PAAF1Q9BRP4 392 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 HERC2P3Q9BVR0 1158 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 NAT10Q9H0A0 1025 aaKnown RBP13.43□□□□□ -0.26
COL4A5-206ENST00000489230 TLE6Q9H808 572 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 ANO10Q9NW15 660 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 TUBGCP4Q9UGJ1 667 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 DSEQ9UL01 958 aa13.43□□□□□ -0.26
COL4A5-206ENST00000489230 COL4A4P53420 1690 aaPredicted RBP13.43□□□□□ -0.26
COL4A5-206ENST00000489230 PI4K2BG5E9Z4 385 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 H7C4K7 107 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 CASP4P49662 377 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 TAF6P49848 677 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 TRPC3Q13507 836 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 TPD52L1Q16890 204 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-206ENST00000489230 SV2CQ496J9 727 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 KIAA0319Q5VV43 1072 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 TTI2Q6NXR4 508 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 DSTYKQ6XUX3 929 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 TRAPPC11Q7Z392 1133 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 EFCAB13Q8IY85 973 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 RNF168Q8IYW5 571 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-206ENST00000489230 BCL7CQ8WUZ0 217 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-206ENST00000489230 RABGGTAQ92696 567 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 KHSRPQ92945 711 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL4A5-206ENST00000489230 SUSD3Q96L08 255 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 GPR62Q9BZJ7 368 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 ZBP1Q9H171 429 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 UBE2ZQ9H832 354 aaPredicted RBP13.42□□□□□ -0.26
COL4A5-206ENST00000489230 GOLGA2P5Q9HBQ8 144 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 FNIP2Q9P278 1114 aa13.42□□□□□ -0.26
COL4A5-206ENST00000489230 ARMCX3Q9UH62 379 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms