RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 SLC18A1P54219 525 aa20.71■□□□□ 0.91
HMG20B-213ENST00000488973 ZNF365Q70YC5 407 aa20.71■□□□□ 0.91
HMG20B-213ENST00000488973 KIAA0825Q8IV33 1275 aa20.71■□□□□ 0.91
HMG20B-213ENST00000488973 AGGF1Q8N302 714 aaeCLIP20.71■□□□□ 0.91
HMG20B-213ENST00000488973 PWWP2AQ96N64 755 aa20.71■□□□□ 0.91
HMG20B-213ENST00000488973 MYLK2Q9H1R3 596 aa20.71■□□□□ 0.91
HMG20B-213ENST00000488973 R3HDM2Q9Y2K5 976 aaKnown RBP20.71■□□□□ 0.91
HMG20B-213ENST00000488973 MRPL11Q9Y3B7 192 aaKnown RBP20.71■□□□□ 0.91
HMG20B-213ENST00000488973 USH1CQ9Y6N9 552 aa20.71■□□□□ 0.91
HMG20B-213ENST00000488973 MROH7Q68CQ1 1323 aa20.71■□□□□ 0.91
HMG20B-213ENST00000488973 SMNDC1O75940 238 aaKnown RBP eCLIP20.7■□□□□ 0.91
HMG20B-213ENST00000488973 FESP07332 822 aa20.7■□□□□ 0.91
HMG20B-213ENST00000488973 RRM1P23921 792 aa20.7■□□□□ 0.91
HMG20B-213ENST00000488973 RARRES1P49788 294 aa20.7■□□□□ 0.91
HMG20B-213ENST00000488973 TNIP1Q15025 636 aa20.7■□□□□ 0.91
HMG20B-213ENST00000488973 SNRNP35Q16560 246 aaKnown RBP20.7■□□□□ 0.91
HMG20B-213ENST00000488973 RGS9BPQ6ZS82 235 aa20.7■□□□□ 0.91
HMG20B-213ENST00000488973 MXRA8Q9BRK3 442 aa20.7■□□□□ 0.91
HMG20B-213ENST00000488973 GOLGA8IPA6NC78 632 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 GOLGA8JA6NMD2 632 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 MYBL1P10243 752 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 UNGP13051 313 aaPredicted RBP20.7■□□□□ 0.9
HMG20B-213ENST00000488973 VPS41P49754 854 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 IZUMO3Q5VZ72 239 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 MCOLN2Q8IZK6 566 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 INPP5DQ92835 1189 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 TRIM11Q96F44 468 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 C9orf72Q96LT7 481 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 TMEM237Q96Q45 408 aa20.7■□□□□ 0.9
HMG20B-213ENST00000488973 RANBP17Q9H2T7 1088 aaKnown RBP20.7■□□□□ 0.9
HMG20B-213ENST00000488973 RGS17Q9UGC6 210 aaPredicted RBP20.7■□□□□ 0.9
HMG20B-213ENST00000488973 E7ENQ6 273 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 FAM163BP0C2L3 166 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 BLMHQ13867 455 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 TMED2Q15363 201 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 CCDC174Q6PII3 467 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 FAM47EQ6ZV65 393 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 TRABD2AQ86V40 505 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 VSIG1Q86XK7 387 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 CBWD2Q8IUF1 395 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 LARGE2Q8N3Y3 721 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 SLC17A8Q8NDX2 589 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 FBXL13Q8NEE6 735 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 TIPINQ9BVW5 301 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 CORO1CQ9ULV4 474 aaPredicted RBP20.69■□□□□ 0.9
HMG20B-213ENST00000488973 ZHX2Q9Y6X8 837 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 DDX39AO00148 427 aaKnown RBP20.69■□□□□ 0.9
HMG20B-213ENST00000488973 HGSO14964 777 aaPredicted RBP20.69■□□□□ 0.9
HMG20B-213ENST00000488973 PRPF4O43172 522 aaKnown RBP eCLIP20.69■□□□□ 0.9
HMG20B-213ENST00000488973 IMPDH2P12268 514 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 MAGEA4P43358 317 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 NCKAP1LP55160 1127 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 CAPRIN2Q6IMN6 1127 aaKnown RBP20.69■□□□□ 0.9
HMG20B-213ENST00000488973 PODNQ7Z5L7 613 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 ZCCHC9Q8N567 271 aaKnown RBP20.69■□□□□ 0.9
HMG20B-213ENST00000488973 CFAP57Q96MR6 1250 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 RAB20Q9NX57 234 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 PHTF1Q9UMS5 762 aa20.69■□□□□ 0.9
HMG20B-213ENST00000488973 GSTTP1A0A1W2PQM5 241 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 RALAP11233 206 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 ADCY1Q08828 1119 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 MOGSQ13724 837 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 ENOSF1Q7L5Y1 443 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 TDRPQ86YL5 185 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 MFN1Q8IWA4 741 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 DENND1AQ8TEH3 1009 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 CCDC127Q96BQ5 260 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 ERP27Q96DN0 273 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 LRRC37BQ96QE4 947 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 EXOC7Q9UPT5 735 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 CHKBQ9Y259 395 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 PSTPIP1O43586 416 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 DCTN3O75935 186 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 GNAZP19086 355 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 GTF2H1P32780 548 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 FKBP1AP62942 108 aaKnown RBP20.68■□□□□ 0.9
HMG20B-213ENST00000488973 SPARCL1Q14515 664 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 TMC2Q8TDI7 906 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 DHX38Q92620 1227 aaKnown RBP20.68■□□□□ 0.9
HMG20B-213ENST00000488973 RBM15Q96T37 977 aaKnown RBP eCLIP20.68■□□□□ 0.93e-7■□□□□ 10.4
HMG20B-213ENST00000488973 RNPEPL1Q9HAU8 725 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 ARHGEF10LQ9HCE6 1279 aa20.68■□□□□ 0.9
HMG20B-213ENST00000488973 LYPLA2O95372 231 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 KLRC2P26717 231 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 ADSSP30520 456 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 ALDH3A1P30838 453 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 MIS18BP1Q6P0N0 1132 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 TEX9Q8N6V9 391 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 TAS1R2Q8TE23 839 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 NAF1Q96HR8 494 aaKnown RBP20.67■□□□□ 0.9
HMG20B-213ENST00000488973 ZNF646O15015 1829 aaPredicted RBP20.67■□□□□ 0.9
HMG20B-213ENST00000488973 ENO4A6NNW6 628 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 SLC16A4O15374 487 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 PROSCO94903 275 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 CALB2P22676 271 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 PEX3P56589 373 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 GCNT1Q02742 428 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 TAF11Q15544 211 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 SPDYAQ5MJ70 313 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 ZNF677Q86XU0 584 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms