RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 KIRREL3Q8IZU9 778 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 METTL13Q8N6R0 699 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 C1orf131Q8NDD1 294 aaKnown RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 MAGEC3Q8TD91 643 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 TCP11Q8WWU5 503 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 MSTO1Q9BUK6 570 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 PTPRJQ12913 1337 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 NOP56O00567 594 aaKnown RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 FTLP02792 175 aaPredicted RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 SLC10A3P09131 477 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 EZRP15311 586 aaKnown RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 RAB27AP51159 221 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 GUCY2FP51841 1108 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 CDR2Q01850 454 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 GRM1Q13255 1194 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 PLCB4Q15147 1175 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 PTGISQ16647 500 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 TRIM50Q86XT4 487 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 ZNF473Q8WTR7 871 aaKnown RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 CASKIN2Q8WXE0 1202 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 DDX1Q92499 740 aaKnown RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 ZBTB10Q96DT7 871 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 ZBTB45Q96K62 511 aaPredicted RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 ATP6V1G3Q96LB4 118 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 CGRRF1Q99675 332 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 C1orf112Q9NSG2 853 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 RBAKQ9NYW8 714 aaPredicted RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 AMFRQ9UKV5 643 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 TTC7AQ9ULT0 858 aaPredicted RBP15.16■□□□□ 0.02
RPL13A-212ENST00000488946 CNTNAP2Q9UHC6 1331 aa15.16■□□□□ 0.02
RPL13A-212ENST00000488946 PGRMC1O00264 195 aaKnown RBP15.15■□□□□ 0.02
RPL13A-212ENST00000488946 DDX3YO15523 660 aaKnown RBP15.15■□□□□ 0.02
RPL13A-212ENST00000488946 FAM189A1O60320 539 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 PDE6CP51160 858 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 C1QTNF12Q5T7M4 302 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 TDRD10Q5VZ19 366 aaKnown RBP15.15■□□□□ 0.02
RPL13A-212ENST00000488946 RASAL3Q86YV0 1011 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 DRAXINQ8NBI3 349 aaPredicted RBP15.15■□□□□ 0.02
RPL13A-212ENST00000488946 WHAMMQ8TF30 809 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 GLG1Q92896 1179 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 FNBP1Q96RU3 617 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 KRT12Q99456 494 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.028e-19■■■■■ 115.4
RPL13A-212ENST00000488946 DIS3Q9Y2L1 958 aaKnown RBP15.15■□□□□ 0.02
RPL13A-212ENST00000488946 MSCO60682 206 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 HLA-DRAP01903 254 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 MDH1P40925 334 aaKnown RBP15.15■□□□□ 0.02
RPL13A-212ENST00000488946 ACOT2P49753 483 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 TNNC1P63316 161 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 GPC5P78333 572 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 MXD4Q14582 209 aaPredicted RBP15.15■□□□□ 0.02
RPL13A-212ENST00000488946 ZBTB41Q5SVQ8 909 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 ANKRD23Q86SG2 305 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 CEP57Q86XR8 500 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 PRPF31Q8WWY3 499 aaKnown RBP15.15■□□□□ 0.02
RPL13A-212ENST00000488946 SPATA33Q96N06 139 aa15.15■□□□□ 0.02
RPL13A-212ENST00000488946 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.021e-16■■□□□ 14.4
RPL13A-212ENST00000488946 NOC2LQ9Y3T9 749 aaKnown RBP15.15■□□□□ 0.02
RPL13A-212ENST00000488946 FAM155AB1AL88 458 aaPredicted RBP15.14■□□□□ 0.01
RPL13A-212ENST00000488946 HMGB1P1B2RPK0 211 aaPredicted RBP15.14■□□□□ 0.01
RPL13A-212ENST00000488946 VNN1O95497 513 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 MMEP08473 750 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 NOGQ13253 232 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 SNX1Q13596 522 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 TTLL4Q14679 1199 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 SNCBQ16143 134 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 BRSK2Q8IWQ3 736 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 MYCBPAPQ8TBZ2 947 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 DHX38Q92620 1227 aaKnown RBP15.14■□□□□ 0.01
RPL13A-212ENST00000488946 FAM84AQ96KN4 292 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 CCT8L2Q96SF2 557 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 MRPL4Q9BYD3 311 aaKnown RBP15.14■□□□□ 0.01
RPL13A-212ENST00000488946 HOMER3Q9NSC5 361 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 ANKFY1Q9P2R3 1169 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 CEP104O60308 925 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 TXNP10599 105 aaKnown RBP15.14■□□□□ 0.01
RPL13A-212ENST00000488946 CYP2C8P10632 490 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 MARK3P27448 753 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 LAMTOR4Q0VGL1 99 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 ZNF792Q3KQV3 632 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 SPRYD7Q5W111 196 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 ARMCX2Q7L311 632 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 NLRP14Q86W24 1093 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 FAM228AQ86W67 206 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 GPRC5AQ8NFJ5 357 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 SPDL1Q96EA4 605 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 C2orf40Q9H1Z8 148 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 SMARCAD1Q9H4L7 1026 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 ACP6Q9NPH0 428 aa15.14■□□□□ 0.01
RPL13A-212ENST00000488946 SRRM3A6NNA2 597 aaPredicted RBP15.13■□□□□ 0.01
RPL13A-212ENST00000488946 ABLIM1O14639 778 aa15.13■□□□□ 0.01
RPL13A-212ENST00000488946 TOM1L1O75674 476 aa15.13■□□□□ 0.01
RPL13A-212ENST00000488946 CYP1A2P05177 515 aa15.13■□□□□ 0.01
RPL13A-212ENST00000488946 NEFHP12036 1026 aa15.13■□□□□ 0.01
RPL13A-212ENST00000488946 TNNI1P19237 187 aa15.13■□□□□ 0.01
RPL13A-212ENST00000488946 HSPA9P38646 679 aaKnown RBP15.13■□□□□ 0.01
RPL13A-212ENST00000488946 PIK3CAP42336 1068 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms