RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ACOT2P49753 483 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 MRE11P49959 708 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 CLCN5P51795 746 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 HTR4Q13639 388 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 PABPC1LQ4VXU2 614 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 PARM1Q6UWI2 310 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 SV2BQ7L1I2 683 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 RTL10Q7L3V2 364 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 ZNF720Q7Z2F6 126 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 SFR1Q86XK3 245 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 MAP4K3Q8IVH8 894 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 ZSCAN16Q9H4T2 348 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 CYP4F11Q9HBI6 524 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 TBC1D7Q9P0N9 293 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 TFIP11Q9UBB9 837 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 UBQLN1Q9UMX0 589 aaKnown RBP12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 PCDHB8Q9UN66 801 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 TIMM13Q9Y5L4 95 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 ZFP37Q9Y6Q3 630 aaPredicted RBP12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 ZNF318Q5VUA4 2279 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 C2orf16Q68DN1 1984 aa12.98□□□□□ -0.33
CCHCR1-215ENST00000488920 A0A087X0B3 334 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 H0Y858 1186 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 PPEF2O14830 753 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 GALR2O43603 387 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 ADRB2P07550 413 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 POU2F2P09086 479 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 SRFP11831 508 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 ATF2P15336 505 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 CYP3A5P20815 502 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 ABCD1P33897 745 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 FOXD4L5Q5VV16 416 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 ADALQ6DHV7 355 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 JADE1Q6IE81 842 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 SLFN12LQ6IEE8 588 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 CCDC73Q6ZRK6 1079 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 FOXD4L4Q8WXT5 416 aaPredicted RBP12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 ING5Q8WYH8 240 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 FGF14Q92915 247 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 ST6GALNAC4Q9H4F1 302 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 MRPL44Q9H9J2 332 aaKnown RBP12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 FAM86C1Q9NVL1 165 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 WNT16Q9UBV4 365 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 CA14Q9ULX7 337 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 DENND4AQ7Z401 1863 aa12.97□□□□□ -0.33
CCHCR1-215ENST00000488920 ARHGEF37A1IGU5 675 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 KRBA1A5PL33 1030 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 M0QZQ0 153 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 TULP1O00294 542 aaPredicted RBP12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 XPOTO43592 962 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 LRG1P02750 347 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 RHOP08100 348 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 NFICP08651 508 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 IDEP14735 1019 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 PTPN2P17706 415 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 STAT6P42226 847 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 NUBP1P53384 320 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 YWHAHQ04917 246 aaPredicted RBP12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 ADCY1Q08828 1119 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 KCNA1Q09470 495 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 STK38Q15208 465 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 SLC5A9Q2M3M2 681 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 SPATA1Q5VX52 437 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 TPGS2Q68CL5 300 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 CWF19L1Q69YN2 538 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 ZNF280DQ6N043 979 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 DSTYKQ6XUX3 929 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 RNF19BQ6ZMZ0 732 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 CD302Q8IX05 232 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 TCEAL8Q8IYN2 117 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 PDILTQ8N807 584 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 BEST2Q8NFU1 509 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 GPR152Q8TDT2 470 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 ATOH1Q92858 354 aaPredicted RBP12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 SNX21Q969T3 373 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 MCRS1Q96EZ8 462 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 TSPAN18Q96SJ8 248 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 CORO1BQ9BR76 489 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 AGO2Q9UKV8 859 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 KCNH3Q9ULD8 1083 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 MRPS23Q9Y3D9 190 aaKnown RBP12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 STYXL1Q9Y6J8 313 aa12.96□□□□□ -0.33
CCHCR1-215ENST00000488920 VWA8A3KMH1 1905 aa12.96□□□□□ -0.34
CCHCR1-215ENST00000488920 SPTLC1O15269 473 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 PPP1R37O75864 691 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 OAZ2O95190 189 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 OR4Q2P0C623 313 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 CPB1P15086 417 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 GAP43P17677 238 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 ADSSP30520 456 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 NASPP49321 788 aaPredicted RBP12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 LILRA4P59901 499 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 GPC5P78333 572 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 TMEM132DQ14C87 1099 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 C9orf57Q5W0N0 161 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 USP37Q86T82 979 aa12.95□□□□□ -0.34
CCHCR1-215ENST00000488920 NPAS3Q8IXF0 933 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms