RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ARHGAP29Q52LW3 1261 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 PLXDC1Q8IUK5 500 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 MDM1Q8TC05 714 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 HOXB13Q92826 284 aaPredicted RBP4.19□□□□□ -1.74
CD46-215ENST00000488596 CAVIN3Q969G5 261 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 MVB12AQ96EY5 273 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 C8orf48Q96LL4 319 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 COQ10AQ96MF6 247 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 UHRF1Q96T88 793 aaPredicted RBP4.19□□□□□ -1.74
CD46-215ENST00000488596 ACO2Q99798 780 aaKnown RBP4.19□□□□□ -1.74
CD46-215ENST00000488596 ADAM2Q99965 735 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 ALG13Q9NP73 1137 aaKnown RBP4.19□□□□□ -1.74
CD46-215ENST00000488596 DDX20Q9UHI6 824 aaKnown RBP4.19□□□□□ -1.74
CD46-215ENST00000488596 MAP3K2Q9Y2U5 619 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 PCDHB1Q9Y5F3 818 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 SPATA31A6Q5VVP1 1343 aa4.19□□□□□ -1.74
CD46-215ENST00000488596 GOLGA6CA6NDK9 693 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 GOLGA6BA6NDN3 693 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 LRRC14BA6NHZ5 514 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 AMY1AP04745 511 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 ALDH2P05091 517 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 GOLGA6DP0CG33 693 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 GUCY1B3Q02153 619 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 APBA1Q02410 837 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 TP53BP2Q13625 1128 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 PGS1Q32NB8 556 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 GFOD2Q3B7J2 385 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 METRNLQ641Q3 311 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 DRICH1Q6PGQ1 229 aaPredicted RBP4.18□□□□□ -1.74
CD46-215ENST00000488596 MIGA2Q7L4E1 593 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 ZGPATQ8N5A5 531 aaKnown RBP4.18□□□□□ -1.74
CD46-215ENST00000488596 FAM98AQ8NCA5 519 aaKnown RBP4.18□□□□□ -1.74
CD46-215ENST00000488596 SIMC1Q8NDZ2 872 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 OR7D4Q8NG98 312 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 PPP1R35Q8TAP8 253 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 DIS3LQ8TF46 1054 aaKnown RBP4.18□□□□□ -1.74
CD46-215ENST00000488596 ZNF480Q8WV37 535 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 ASB10Q8WXI3 467 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 TAAR9Q96RI9 348 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 DMRTA2Q96SC8 542 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 MAP3K14Q99558 947 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 RSAD1Q9HA92 442 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 BCO1Q9HAY6 547 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 NMRK2Q9NPI5 230 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 OBP2AQ9NY56 170 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 GOLGA6AQ9NYA3 693 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 GABBR1Q9UBS5 961 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 INSL6Q9Y581 213 aa4.18□□□□□ -1.74
CD46-215ENST00000488596 TBKBP1A7MCY6 615 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 FAM171A2A8MVW0 826 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 DIRC3C9JPN6 131 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 INO80B-WBP1J3KQ70 363 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 ENDOD1O94919 500 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 SPDEFO95238 335 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 U2AF1L5P0DN76 240 aaPredicted RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 HKR1P10072 659 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 FPR1P21462 350 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 RGS19P49795 217 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 U2AF1Q01081 240 aaKnown RBP eCLIP4.17□□□□□ -1.742e-11■■■■□ 23.4
CD46-215ENST00000488596 TARDBPQ13148 414 aaKnown RBP eCLIP4.17□□□□□ -1.74
CD46-215ENST00000488596 GRM3Q14832 879 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 LLGL1Q15334 1064 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 KHDC1Q4VXA5 237 aaKnown RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 MFSD14BQ5SR56 506 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 PRAMEF14Q5SWL7 426 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 FAM102AQ5T9C2 384 aaPredicted RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 SLC4A10Q6U841 1118 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 RSPH3Q86UC2 560 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 DRC7Q8IY82 874 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 TRMT2AQ8IZ69 625 aaKnown RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 CAMKK1Q8N5S9 505 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 ZBTB34Q8NCN2 500 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 OR10H5Q8NGA6 315 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 RUNDC1Q96C34 613 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 TIFAQ96CG3 184 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 C1GALT1C1Q96EU7 318 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 CEP95Q96GE4 821 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 CLPTM1LQ96KA5 538 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 CDC5LQ99459 802 aaKnown RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 NEU1Q99519 415 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 VRK1Q99986 396 aaPredicted RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 INO80BQ9C086 356 aaPredicted RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 SENP6Q9GZR1 1112 aaPredicted RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 TDP1Q9NUW8 608 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 AJAP1Q9UKB5 411 aaPredicted RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 CLCA2Q9UQC9 943 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 ACTL7AQ9Y615 435 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 MYBBP1AQ9BQG0 1328 aaKnown RBP4.17□□□□□ -1.74
CD46-215ENST00000488596 SALL3Q9BXA9 1300 aa4.17□□□□□ -1.74
CD46-215ENST00000488596 MARCH11A6NNE9 402 aa4.16□□□□□ -1.74
CD46-215ENST00000488596 KIF3BO15066 747 aa4.16□□□□□ -1.74
CD46-215ENST00000488596 GASTP01350 101 aa4.16□□□□□ -1.74
CD46-215ENST00000488596 ERBB2P04626 1255 aa4.16□□□□□ -1.74
CD46-215ENST00000488596 EGR2P11161 476 aaPredicted RBP4.16□□□□□ -1.74
CD46-215ENST00000488596 DDCP20711 480 aa4.16□□□□□ -1.74
CD46-215ENST00000488596 DDX6P26196 483 aaKnown RBP eCLIP4.16□□□□□ -1.74
CD46-215ENST00000488596 PCSK1P29120 753 aa4.16□□□□□ -1.74
CD46-215ENST00000488596 CXCR5P32302 372 aa4.16□□□□□ -1.74
CD46-215ENST00000488596 CRHR1P34998 444 aa4.16□□□□□ -1.74
CD46-215ENST00000488596 MPLP40238 635 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms