RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 C9orf57Q5W0N0 161 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 CLEC17AQ6ZS10 378 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 CEP57Q86XR8 500 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 SMRP1Q8NCR6 262 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 SPATA20Q8TB22 786 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 GOLGA5Q8TBA6 731 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 LNX1Q8TBB1 728 aaPredicted RBP17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 CASP10Q92851 521 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 SUSD3Q96L08 255 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 PDE11AQ9HCR9 933 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 CD207Q9UJ71 328 aa17.34■□□□□ 0.37
ERGIC3-216ENST00000488384 TSC2P49815 1807 aa17.33■□□□□ 0.37
ERGIC3-216ENST00000488384 PTPRJQ12913 1337 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 ANO9A1A5B4 782 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 TRAPPC3O43617 180 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 RPL17P18621 184 aaKnown RBP17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 KLRC2P26717 231 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 AARSP49588 968 aaKnown RBP eCLIP17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 CLCN4P51793 760 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 CREMQ03060 361 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 SMAD4Q13485 552 aaKnown RBP17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 SNRNP35Q16560 246 aaKnown RBP17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 ANKRD54Q6NXT1 300 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 SYCE2Q6PIF2 218 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 PPFIBP1Q86W92 1011 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 NT5DC4Q86YG4 428 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 ELOA2Q8IYF1 753 aaPredicted RBP17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 SMYD4Q8IYR2 804 aaPredicted RBP17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 XXYLT1Q8NBI6 393 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 KIAA1586Q9HCI6 787 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 RMND1Q9NWS8 449 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 DPP3Q9NY33 737 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 FNIP2Q9P278 1114 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 MAPK8IP1Q9UQF2 711 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 PCDHA5Q9Y5H7 936 aa17.33■□□□□ 0.36
ERGIC3-216ENST00000488384 ZNF233A6NK53 670 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 PIRO00625 290 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 PDXKO00764 312 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 SYN3O14994 580 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 PRPF40AO75400 957 aaKnown RBP17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 SMC2O95347 1197 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 IL9P15248 144 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 TFAMQ00059 246 aaKnown RBP17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 PTCRAQ6ISU1 281 aaPredicted RBP17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 PDXDC1Q6P996 788 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 GUF1Q8N442 669 aaKnown RBP17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 KHSRPQ92945 711 aaKnown RBP eCLIP17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 SMARCE1Q969G3 411 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 GSDMAQ96QA5 445 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 CLSTN3Q9BQT9 956 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 MTRRQ9UBK8 725 aa17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 HOOK1Q9UJC3 728 aaKnown RBP17.32■□□□□ 0.36
ERGIC3-216ENST00000488384 SCN1AP35498 2009 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 GRXCR2A6NFK2 248 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 M0QZQ0 153 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 SPTLC1O15269 473 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 ADAM12O43184 909 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 MBTPS2O43462 519 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 KIF20AO95235 890 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 GLUD1P00367 558 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 NR3C1P04150 777 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 CYP24A1Q07973 514 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 PUS10Q3MIT2 529 aaKnown RBP17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 VARS2Q5ST30 1063 aaKnown RBP17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 LMBRD2Q68DH5 695 aaPredicted RBP17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 RSPO2Q6UXX9 243 aaPredicted RBP17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 SLC9A9Q8IVB4 645 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 GLYCTKQ8IVS8 523 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 C1orf127Q8N9H9 656 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 TMEM174Q8WUU8 243 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 MTMR12Q9C0I1 747 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 GZF1Q9H116 711 aaPredicted RBP17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 CD320Q9NPF0 282 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 DZANK1Q9NVP4 752 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 TRAF3IP3Q9Y228 551 aa17.31■□□□□ 0.36
ERGIC3-216ENST00000488384 TULP1O00294 542 aaPredicted RBP17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 EXOC3O60645 756 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 HOXB8P17481 243 aaPredicted RBP17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 LILRA4P59901 499 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 PSMD6Q15008 389 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 ZCWPW2Q504Y3 356 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 ZNF658Q5TYW1 1059 aaPredicted RBP17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 SCARA3Q6AZY7 606 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 ANKS3Q6ZW76 656 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 CXorf38Q8TB03 319 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 APOL5Q9BWW9 433 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 S1PR5Q9H228 398 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 MAN1C1Q9NR34 630 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 USP15Q9Y4E8 981 aaPredicted RBP17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 BACE2Q9Y5Z0 518 aa17.3■□□□□ 0.36
ERGIC3-216ENST00000488384 TGM5O43548 720 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 ITGB3P05106 788 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 TMEM191BP0C7N4 346 aa17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 POLR2BP30876 1174 aaKnown RBP17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 MRPL58Q14197 206 aaKnown RBP17.29■□□□□ 0.36
ERGIC3-216ENST00000488384 SURF1Q15526 300 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms