RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 CACNG4Q9UBN1 327 aa15.15■□□□□ 0.02
NUP188-207ENST00000487952 PTPRSQ13332 1948 aa15.15■□□□□ 0.02
NUP188-207ENST00000487952 FNDC1Q4ZHG4 1894 aaPredicted RBP15.14■□□□□ 0.01
NUP188-207ENST00000487952 ANO9A1A5B4 782 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 LINC01553A4QN01 128 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 NT5C1B-RDH14C9J2C7 533 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 B4GALT3O60512 393 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 TADA2AO75478 443 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 PAX3P23760 479 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 ATICP31939 592 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 PBX2P40425 430 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 PBX3P40426 434 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 TAF6P49848 677 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 FANCCQ00597 558 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 UPP1Q16831 310 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 SV2CQ496J9 727 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 CBWD6Q4V339 395 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 WDR44Q5JSH3 913 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 CBWD3Q5JTY5 395 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 CBWD5Q5RIA9 395 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 PPP2R2DQ66LE6 453 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 LRRC52Q8N7C0 313 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 CLP1Q92989 425 aaKnown RBP15.14■□□□□ 0.01
NUP188-207ENST00000487952 TMEM169Q96HH4 297 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 TGS1Q96RS0 853 aaKnown RBP15.14■□□□□ 0.01
NUP188-207ENST00000487952 SLC28A3Q9HAS3 691 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 RAB20Q9NX57 234 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 SPG21Q9NZD8 308 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 SIX4Q9UIU6 781 aa15.14■□□□□ 0.01
NUP188-207ENST00000487952 YBX2Q9Y2T7 364 aaKnown RBP15.14■□□□□ 0.01
NUP188-207ENST00000487952 COL4A6Q14031 1691 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 LGALS16A8MUM7 142 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 PIRO00625 290 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 PMM2O15305 246 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 TRAPPC3O43617 180 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 TPM3P06753 285 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 ANK1P16157 1881 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 DNAJB2P25686 324 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 MYL6P60660 151 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 SGSM1Q2NKQ1 1148 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 ZNF699Q32M78 642 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 MIIPQ5JXC2 388 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 DSTYKQ6XUX3 929 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 GBP6Q6ZN66 633 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 C15orf39Q6ZRI6 1047 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 TMEM130Q8N3G9 435 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 TAS1R2Q8TE23 839 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 HASPINQ8TF76 798 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 TIFAQ96CG3 184 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 HPDLQ96IR7 371 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 PAAF1Q9BRP4 392 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 GCNT4Q9P109 453 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 TDRD15B5MCY1 1934 aaKnown RBP15.13■□□□□ 0.01
NUP188-207ENST00000487952 TRIP11Q15643 1979 aa15.13■□□□□ 0.01
NUP188-207ENST00000487952 ARHGEF37A1IGU5 675 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 GTPBP10A4D1E9 387 aaKnown RBP15.12■□□□□ 0.01
NUP188-207ENST00000487952 LRRC10BA6NIK2 292 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 TMEM189-UBE2V1I3L0A0 370 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 PPEF2O14830 753 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 TNRC18O15417 2968 aaPredicted RBP15.12■□□□□ 0.01
NUP188-207ENST00000487952 CBFA2T2O43439 604 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 KIF4AO95239 1232 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 VNN1O95497 513 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 CST3P01034 146 aaPredicted RBP15.12■□□□□ 0.01
NUP188-207ENST00000487952 P4HA1P13674 534 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 BMPR1AP36894 532 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 UBASH3AP57075 661 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 UBXN1Q04323 297 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 KRT17Q04695 432 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 ELAVL2Q12926 359 aaKnown RBP15.12■□□□□ 0.01
NUP188-207ENST00000487952 EXOC3L4Q17RC7 722 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 LRIT3Q3SXY7 679 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 SLC39A11Q8N1S5 342 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 TAF4BQ92750 862 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 PCMTD1Q96MG8 357 aaPredicted RBP15.12■□□□□ 0.01
NUP188-207ENST00000487952 C17orf80Q9BSJ5 609 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 PLVAPQ9BX97 442 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 ADAM28Q9UKQ2 775 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 MTUS1Q9ULD2 1270 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 COQ4Q9Y3A0 265 aa15.12■□□□□ 0.01
NUP188-207ENST00000487952 SF3B1O75533 1304 aaKnown RBP eCLIP15.12■□□□□ 0.01
NUP188-207ENST00000487952 RB1P06400 928 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 LILRA4P59901 499 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 ERVK-21P61565 698 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 TNNC1P63316 161 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 TAP1Q03518 808 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 UVSSAQ2YD98 709 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 EPC2Q52LR7 807 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 ZNF667Q5HYK9 610 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 FUT10Q6P4F1 479 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 C3orf58Q8NDZ4 430 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 FBXO22Q8NEZ5 403 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 IGSF21Q96ID5 467 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 NT5C1BQ96P26 610 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 CRACR2AQ9BSW2 395 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 PI4K2AQ9BTU6 479 aa15.11■□□□□ 0.01
NUP188-207ENST00000487952 C11orf84Q9BUA3 381 aaPredicted RBP15.11■□□□□ 0.01
NUP188-207ENST00000487952 INTS2Q9H0H0 1204 aaKnown RBP15.11■□□□□ 0.01
NUP188-207ENST00000487952 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.11■□□□□ 0.01
NUP188-207ENST00000487952 MARCH5Q9NX47 278 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms