RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 SLC39A2Q9NP94 309 aa18.5■□□□□ 0.55
HMG20B-212ENST00000487894 MTRRQ9UBK8 725 aa18.5■□□□□ 0.55
HMG20B-212ENST00000487894 CIZ1Q9ULV3 898 aaPredicted RBP18.5■□□□□ 0.55
HMG20B-212ENST00000487894 C2CD2Q9Y426 696 aa18.5■□□□□ 0.55
HMG20B-212ENST00000487894 NUB1Q9Y5A7 615 aa18.5■□□□□ 0.55
HMG20B-212ENST00000487894 DOCK6Q96HP0 2047 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 GOLGA8IPA6NC78 632 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 C19orf67A6NJJ6 358 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 GOLGA8JA6NMD2 632 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 PPEF2O14830 753 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 ADAM12O43184 909 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 TGFB1I1O43294 461 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 TGM5O43548 720 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 IL18RAPO95256 599 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 LDHAP00338 332 aaKnown RBP18.49■□□□□ 0.55
HMG20B-212ENST00000487894 C1RP00736 705 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 MYL1P05976 194 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 MCM4P33991 863 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 ITIH3Q06033 890 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 KMT5BQ4FZB7 885 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 LILRA6Q6PI73 481 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 KRBA2Q6ZNG9 492 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 PALB2Q86YC2 1186 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 NELFCDQ8IXH7 590 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 BEST2Q8NFU1 509 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 SUSD3Q96L08 255 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 ADAM7Q9H2U9 754 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 EXOC1Q9NV70 894 aa18.49■□□□□ 0.55
HMG20B-212ENST00000487894 SPDYE4A6NLX3 237 aa18.48■□□□□ 0.55
HMG20B-212ENST00000487894 SYN3O14994 580 aa18.48■□□□□ 0.55
HMG20B-212ENST00000487894 EXTL3O43909 919 aa18.48■□□□□ 0.55
HMG20B-212ENST00000487894 ZNF202O95125 648 aa18.48■□□□□ 0.55
HMG20B-212ENST00000487894 CES5AQ6NT32 575 aa18.48■□□□□ 0.55
HMG20B-212ENST00000487894 RSPO2Q6UXX9 243 aaPredicted RBP18.48■□□□□ 0.55
HMG20B-212ENST00000487894 GJD3Q8N144 294 aa18.48■□□□□ 0.55
HMG20B-212ENST00000487894 GPD1LQ8N335 351 aa18.48■□□□□ 0.55
HMG20B-212ENST00000487894 KIAA0895Q8NCT3 520 aa18.48■□□□□ 0.55
HMG20B-212ENST00000487894 POP1Q99575 1024 aaKnown RBP18.48■□□□□ 0.55
HMG20B-212ENST00000487894 AGPAT3Q9NRZ7 376 aa18.48■□□□□ 0.55
HMG20B-212ENST00000487894 RBAKQ9NYW8 714 aaPredicted RBP18.48■□□□□ 0.55
HMG20B-212ENST00000487894 KIAA0391O15091 583 aaKnown RBP18.47■□□□□ 0.55
HMG20B-212ENST00000487894 RPN1P04843 607 aaKnown RBP18.47■□□□□ 0.55
HMG20B-212ENST00000487894 WEE2P0C1S8 567 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 SPATA31D3P0C874 917 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 SSTR3P32745 418 aaPredicted RBP18.47■□□□□ 0.55
HMG20B-212ENST00000487894 AARSP49588 968 aaKnown RBP eCLIP18.47■□□□□ 0.55
HMG20B-212ENST00000487894 DPYDQ12882 1025 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 STK4Q13043 487 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 VARS2Q5ST30 1063 aaKnown RBP18.47■□□□□ 0.55
HMG20B-212ENST00000487894 C9orf57Q5W0N0 161 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 TMC5Q6UXY8 1006 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 SPATA31D4Q6ZUB0 917 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 ANKS3Q6ZW76 656 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 FMR1NBQ8N0W7 255 aaPredicted RBP18.47■□□□□ 0.55
HMG20B-212ENST00000487894 HDAC7Q8WUI4 952 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 PHF7Q9BWX1 381 aaPredicted RBP18.47■□□□□ 0.55
HMG20B-212ENST00000487894 POMKQ9H5K3 350 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 HSPBP1Q9NZL4 362 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 FBXW11Q9UKB1 542 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 BACE2Q9Y5Z0 518 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 CDY1Q9Y6F8 540 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 TRIOO75962 3097 aa18.47■□□□□ 0.55
HMG20B-212ENST00000487894 DOCK8Q8NF50 2099 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 ANO9A1A5B4 782 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 M0QZQ0 153 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 OR1D2P34982 312 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 MTHFRP42898 656 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 PSMD2Q13200 908 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 MRPL58Q14197 206 aaKnown RBP18.46■□□□□ 0.55
HMG20B-212ENST00000487894 NT5DC4Q86YG4 428 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 CMASQ8NFW8 434 aaPredicted RBP18.46■□□□□ 0.55
HMG20B-212ENST00000487894 NOC3LQ8WTT2 800 aaKnown RBP18.46■□□□□ 0.55
HMG20B-212ENST00000487894 KHSRPQ92945 711 aaKnown RBP eCLIP18.46■□□□□ 0.55
HMG20B-212ENST00000487894 NECTIN4Q96NY8 510 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 PLEKHA4Q9H4M7 779 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 DPP7Q9UHL4 492 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 PCDHB8Q9UN66 801 aa18.46■□□□□ 0.55
HMG20B-212ENST00000487894 LOC730098B7Z3J9 87 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 PIRO00625 290 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 TBC1D4O60343 1298 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 RFPL2O75678 378 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 PAPLNO95428 1278 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 ANP32AP39687 249 aaKnown RBP18.45■□□□□ 0.54
HMG20B-212ENST00000487894 RAB33AQ14088 237 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 KNOP1Q1ED39 458 aaKnown RBP18.45■□□□□ 0.54
HMG20B-212ENST00000487894 ELMSAN1Q6PJG2 1045 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 C15orf39Q6ZRI6 1047 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 GPR149Q86SP6 731 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 CBWD2Q8IUF1 395 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 KREMEN2Q8NCW0 462 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 ENGASEQ8NFI3 743 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 RIPOR3Q96MK2 946 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 DPP3Q9NY33 737 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 NOTCH4Q99466 2003 aa18.45■□□□□ 0.54
HMG20B-212ENST00000487894 GOLGA6L4A6NEF3 574 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 CLIC2O15247 247 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 SPTLC1O15269 473 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 RHOBTB3O94955 611 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 LILRA4P59901 499 aa18.44■□□□□ 0.54
HMG20B-212ENST00000487894 SNRPFP62306 86 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms