RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 KRT19P08727 400 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 NRIP1P48552 1158 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 PAK1Q13153 545 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 PTPN14Q15678 1187 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 CCDC183Q5T5S1 534 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 FAM186BQ8IYM0 893 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 MRPL43Q8N983 215 aaKnown RBP21.15■□□□□ 0.98
SEC22A-208ENST00000487572 PLEKHO2Q8TD55 490 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 RIN2Q8WYP3 895 aaPredicted RBP21.15■□□□□ 0.98
SEC22A-208ENST00000487572 PPP2R3CQ969Q6 453 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 TLE6Q9H808 572 aa21.15■□□□□ 0.98
SEC22A-208ENST00000487572 MRPL17Q9NRX2 175 aaKnown RBP21.15■□□□□ 0.98
SEC22A-208ENST00000487572 PRRC2BQ5JSZ5 2229 aaKnown RBP21.14■□□□□ 0.98
SEC22A-208ENST00000487572 POLR2BP30876 1174 aaKnown RBP21.14■□□□□ 0.97
SEC22A-208ENST00000487572 GTF2F1P35269 517 aaKnown RBP eCLIP21.14■□□□□ 0.97
SEC22A-208ENST00000487572 PSMC2P35998 433 aaKnown RBP21.14■□□□□ 0.97
SEC22A-208ENST00000487572 DUOXA2Q1HG44 320 aa21.14■□□□□ 0.97
SEC22A-208ENST00000487572 RTP2Q5QGT7 225 aa21.14■□□□□ 0.97
SEC22A-208ENST00000487572 CSGALNACT2Q8N6G5 542 aa21.14■□□□□ 0.97
SEC22A-208ENST00000487572 C1orf127Q8N9H9 656 aa21.14■□□□□ 0.97
SEC22A-208ENST00000487572 TTPALQ9BTX7 342 aa21.14■□□□□ 0.97
SEC22A-208ENST00000487572 GZF1Q9H116 711 aaPredicted RBP21.14■□□□□ 0.97
SEC22A-208ENST00000487572 AGAP1Q9UPQ3 857 aa21.14■□□□□ 0.97
SEC22A-208ENST00000487572 ANO9A1A5B4 782 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 BICDL2A1A5D9 508 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 LRRIQ3A6PVS8 624 aaPredicted RBP21.13■□□□□ 0.97
SEC22A-208ENST00000487572 PIRO00625 290 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 EPB41P11171 864 aaKnown RBP21.13■□□□□ 0.97
SEC22A-208ENST00000487572 KRT13P13646 458 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 TKTP29401 623 aaKnown RBP21.13■□□□□ 0.97
SEC22A-208ENST00000487572 NLRP12P59046 1061 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 DLG4P78352 724 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 FKBP3Q00688 224 aaKnown RBP21.13■□□□□ 0.97
SEC22A-208ENST00000487572 DSG1Q02413 1049 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 HYAL1Q12794 435 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 DPCR1Q3MIW9 517 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 KIAA0319Q5VV43 1072 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 SCARA3Q6AZY7 606 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 TTI2Q6NXR4 508 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 CAVIN1Q6NZI2 390 aaKnown RBP21.13■□□□□ 0.97
SEC22A-208ENST00000487572 PRSS55Q6UWB4 352 aaPredicted RBP21.13■□□□□ 0.97
SEC22A-208ENST00000487572 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.13■□□□□ 0.97
SEC22A-208ENST00000487572 MLKLQ8NB16 471 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 PARD3BQ8TEW8 1205 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 CHST7Q9NS84 486 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 TMEM63CQ9P1W3 806 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 ITGA11Q9UKX5 1188 aa21.13■□□□□ 0.97
SEC22A-208ENST00000487572 MAPK13O15264 365 aa21.12■□□□□ 0.97
SEC22A-208ENST00000487572 SPTLC1O15269 473 aa21.12■□□□□ 0.97
SEC22A-208ENST00000487572 LILRA4P59901 499 aa21.12■□□□□ 0.97
SEC22A-208ENST00000487572 DSTYKQ6XUX3 929 aa21.12■□□□□ 0.97
SEC22A-208ENST00000487572 RBM43Q6ZSC3 357 aaKnown RBP21.12■□□□□ 0.97
SEC22A-208ENST00000487572 EP400NLQ6ZTU2 488 aa21.12■□□□□ 0.97
SEC22A-208ENST00000487572 INTS8Q75QN2 995 aaKnown RBP21.12■□□□□ 0.97
SEC22A-208ENST00000487572 ZNF516Q92618 1163 aa21.12■□□□□ 0.97
SEC22A-208ENST00000487572 SUSD3Q96L08 255 aa21.12■□□□□ 0.97
SEC22A-208ENST00000487572 DUSP9Q99956 384 aaKnown RBP21.12■□□□□ 0.97
SEC22A-208ENST00000487572 SSX2IPQ9Y2D8 614 aa21.12■□□□□ 0.97
SEC22A-208ENST00000487572 R3HCC1Q9Y3T6 440 aaKnown RBP21.12■□□□□ 0.97
SEC22A-208ENST00000487572 TRIM49P0CI25 452 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 TRIM49CP0CI26 452 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 RPL17P18621 184 aaKnown RBP21.11■□□□□ 0.97
SEC22A-208ENST00000487572 PTMSP20962 102 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 FGFR3P22607 806 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 TAF6P49848 677 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 VAMP7P51809 220 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 RBP5P82980 135 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 BFSP1Q12934 665 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 BIRC3Q13489 604 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 LLGL2Q6P1M3 1020 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 TRAPPC11Q7Z392 1133 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 GLYCTKQ8IVS8 523 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 ZC3H3Q8IXZ2 948 aaKnown RBP21.11■□□□□ 0.97
SEC22A-208ENST00000487572 TMC2Q8TDI7 906 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 ZNF560Q96MR9 790 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 EMILIN2Q9BXX0 1053 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 SIX4Q9UIU6 781 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 IRAK3Q9Y616 596 aa21.11■□□□□ 0.97
SEC22A-208ENST00000487572 SLC16A3O15427 465 aaKnown RBP21.1■□□□□ 0.97
SEC22A-208ENST00000487572 LINC01565O15544 149 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 LILRB3O75022 631 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 CLASP2O75122 1294 aaKnown RBP21.1■□□□□ 0.97
SEC22A-208ENST00000487572 PHACTR2O75167 634 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 CNPP09543 421 aaKnown RBP21.1■□□□□ 0.97
SEC22A-208ENST00000487572 PSMD5Q16401 504 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 DUSP6Q16828 381 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 SV2CQ496J9 727 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 SASS6Q6UVJ0 657 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 USP37Q86T82 979 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 CXorf38Q8TB03 319 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 SYAP1Q96A49 352 aaPredicted RBP21.1■□□□□ 0.97
SEC22A-208ENST00000487572 KLHL5Q96PQ7 755 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 MKNK1Q9BUB5 465 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 MMRN2Q9H8L6 949 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 RWDD2AQ9UIY3 292 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 PCDHB8Q9UN66 801 aa21.1■□□□□ 0.97
SEC22A-208ENST00000487572 TIMM13Q9Y5L4 95 aaPredicted RBP21.1■□□□□ 0.97
SEC22A-208ENST00000487572 SYN3O14994 580 aa21.09■□□□□ 0.97
SEC22A-208ENST00000487572 TEX28O15482 410 aa21.09■□□□□ 0.97
SEC22A-208ENST00000487572 CLSTN1O94985 981 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms