RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 DHX8Q14562 1220 aaKnown RBP13.3□□□□□ -0.28
VPS16-208ENST00000487461 PRSS36Q5K4E3 855 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 ZBTB41Q5SVQ8 909 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 GPBP1Q86WP2 473 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 APPL2Q8NEU8 664 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 PJA1Q8NG27 643 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 TCEAL4Q96EI5 215 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 CALML4Q96GE6 196 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 AK8Q96MA6 479 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 CORO1BQ9BR76 489 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 DDX23Q9BUQ8 820 aaKnown RBP13.3□□□□□ -0.28
VPS16-208ENST00000487461 GDE1Q9NZC3 331 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 LARSQ9P2J5 1176 aaKnown RBP13.3□□□□□ -0.28
VPS16-208ENST00000487461 ODF2LQ9ULJ1 636 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 TBX20Q9UMR3 447 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
VPS16-208ENST00000487461 MTF2Q9Y483 593 aaPredicted RBP13.3□□□□□ -0.28
VPS16-208ENST00000487461 KANSL1LA0AUZ9 987 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 H0YCG3 227 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 FAM189A1O60320 539 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 ECI2O75521 394 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
VPS16-208ENST00000487461 LRPAP1P30533 357 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 CCR2P41597 374 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 GUCY2FP51841 1108 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 MCM6Q14566 821 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 MLF2Q15773 248 aaPredicted RBP13.29□□□□□ -0.28
VPS16-208ENST00000487461 ENOX2Q16206 610 aaKnown RBP13.29□□□□□ -0.28
VPS16-208ENST00000487461 TANGO2Q6ICL3 276 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 C1orf210Q8IVY1 113 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 HS6ST3Q8IZP7 471 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 ADSSL1Q8N142 457 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 MYCT1Q8N699 235 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 KIF12Q96FN5 646 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 BICD1Q96G01 975 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 CEP72Q9P209 647 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 AFF4Q9UHB7 1163 aaKnown RBP13.29□□□□□ -0.28
VPS16-208ENST00000487461 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.29□□□□□ -0.28
VPS16-208ENST00000487461 TIMM13Q9Y5L4 95 aaPredicted RBP13.29□□□□□ -0.28
VPS16-208ENST00000487461 INSL5Q9Y5Q6 135 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 R4GN57 208 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 CITO14578 2027 aa13.29□□□□□ -0.28
VPS16-208ENST00000487461 M0QZQ0 153 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 FAM13AO94988 1023 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 OAZ2O95190 189 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 PIGRP01833 764 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 ADRB2P07550 413 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 SP9P0CG40 484 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 PLCG1P19174 1290 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 CYP3A5P20815 502 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 CD72P21854 359 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 LIG4P49917 911 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 ZNF131P52739 623 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 PFKPQ01813 784 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 PRKCQQ04759 706 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 KARSQ15046 597 aaKnown RBP13.28□□□□□ -0.28
VPS16-208ENST00000487461 SF3A1Q15459 793 aaKnown RBP13.28□□□□□ -0.28
VPS16-208ENST00000487461 ZNF280DQ6N043 979 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 RNF19BQ6ZMZ0 732 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 RAD54LQ92698 747 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 FIZ1Q96SL8 496 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 UPF2Q9HAU5 1272 aaKnown RBP13.28□□□□□ -0.28
VPS16-208ENST00000487461 PARVGQ9HBI0 331 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 UBQLN1Q9UMX0 589 aaKnown RBP13.28□□□□□ -0.28
VPS16-208ENST00000487461 CACNA1IQ9P0X4 2223 aa13.28□□□□□ -0.28
VPS16-208ENST00000487461 MYH15Q9Y2K3 1946 aa13.27□□□□□ -0.28
VPS16-208ENST00000487461 CFAP54Q96N23 3096 aa13.27□□□□□ -0.28
VPS16-208ENST00000487461 A0A0B4J269 797 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 FAM170BA6NMN3 283 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 K7ENM7 598 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 ZNF197O14709 1029 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 PPEF2O14830 753 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 HNRNPDLO14979 420 aaKnown RBP13.27□□□□□ -0.29
VPS16-208ENST00000487461 OGTO15294 1046 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 TRAK2O60296 914 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 MOSPD3O75425 235 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 MICAL2O94851 1124 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 VNN2O95498 520 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 BMP15O95972 392 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 FCARP24071 287 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 LONP1P36776 959 aaKnown RBP13.27□□□□□ -0.29
VPS16-208ENST00000487461 AARSP49588 968 aaKnown RBP eCLIP13.27□□□□□ -0.29
VPS16-208ENST00000487461 TWF1Q12792 350 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 KYAT1Q16773 422 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 FAM78AQ5JUQ0 283 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 SLC39A4Q6P5W5 647 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 PDZD4Q76G19 769 aaPredicted RBP13.27□□□□□ -0.29
VPS16-208ENST00000487461 BRAPQ7Z569 592 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 MAML2Q8IZL2 1156 aaPredicted RBP13.27□□□□□ -0.29
VPS16-208ENST00000487461 ELSPBP1Q96BH3 223 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 ZNF512Q96ME7 567 aaPredicted RBP13.27□□□□□ -0.29
VPS16-208ENST00000487461 ZSWIM3Q96MP5 696 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 ZHX3Q9H4I2 956 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 RPF1Q9H9Y2 349 aaKnown RBP13.27□□□□□ -0.29
VPS16-208ENST00000487461 MAFFQ9ULX9 164 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 COL4A3Q01955 1670 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 MYH11P35749 1972 aa13.27□□□□□ -0.29
VPS16-208ENST00000487461 SHISA7A6NL88 538 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms