RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401		A0A0B4J269	797 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	WDR27	A2RRH5	827 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	GFRA3	O60609	400 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	PIGR	P01833	764 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	NMT1	P30419	496 aa	Known RBP	13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	LRPAP1	P30533	357 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	TXLNA	P40222	546 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	TNFSF9	P41273	254 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	GPC5	P78333	572 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	ENOX2	Q16206	610 aa	Known RBP	13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	SPECC1	Q5M775	1068 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	RRAGB	Q5VZM2	374 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	DSTYK	Q6XUX3	929 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	USP37	Q86T82	979 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	NPAS3	Q8IXF0	933 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	CCDC105	Q8IYK2	499 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	TCEAL8	Q8IYN2	117 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	ELMOD1	Q8N336	334 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	BEST2	Q8NFU1	509 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	ING5	Q8WYH8	240 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	MCRS1	Q96EZ8	462 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	SHD	Q96IW2	340 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	EPSTI1	Q96J88	318 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	CORO1B	Q9BR76	489 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	GDE1	Q9NZC3	331 aa		13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	AFF4	Q9UHB7	1163 aa	Known RBP	13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	SRPRB	Q9Y5M8	271 aa	Known RBP	13.54	□□□□□ -0.24
SREBF1-215	ENST00000487401	ZNF197	O14709	1029 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	SEC24A	O95486	1093 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	CPB1	P15086	417 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	SYT1	P21579	422 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	GTF2B	Q00403	316 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	PFKP	Q01813	784 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	CEBPZ	Q03701	1054 aa	Known RBP	13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	YWHAH	Q04917	246 aa	Predicted RBP	13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	ADCY1	Q08828	1119 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	ZBTB6	Q15916	424 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	ZBTB41	Q5SVQ8	909 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	CYP4A22	Q5TCH4	519 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	IQCE	Q6IPM2	695 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	PHLDB3	Q6NSJ2	640 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	USP49	Q70CQ1	688 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	MAP4K3	Q8IVH8	894 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	CD302	Q8IX05	232 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	ZNF512	Q96ME7	567 aa	Predicted RBP	13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	AVEN	Q9NQS1	362 aa	Predicted RBP	13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	SIT1	Q9Y3P8	196 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	INSL5	Q9Y5Q6	135 aa		13.53	□□□□□ -0.24
SREBF1-215	ENST00000487401	ZDBF2	Q9HCK1	2354 aa		13.52	□□□□□ -0.24
SREBF1-215	ENST00000487401		M0QZQ0	153 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	OAZ2	O95190	189 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	PAX3	P23760	479 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	GUCY2F	P51841	1108 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	REST	Q13127	1097 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	PTPA	Q15257	358 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	ANGPT1	Q15389	498 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	SPATA1	Q5VX52	437 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	ADAL	Q6DHV7	355 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	SLFN12L	Q6IEE8	588 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	PDZD4	Q76G19	769 aa	Predicted RBP	13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	SV2B	Q7L1I2	683 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	DYM	Q7RTS9	669 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	INTS4	Q96HW7	963 aa	Known RBP	13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	KXD1	Q9BQD3	176 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	STK17A	Q9UEE5	414 aa		13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	FBXO2	Q9UK22	296 aa	Predicted RBP	13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	CPSF3	Q9UKF6	684 aa	Known RBP	13.52	□□□□□ -0.25
SREBF1-215	ENST00000487401	OR6C75	A6NL08	312 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	ANKRD63	C9JTQ0	380 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	PROB1	E7EW31	1015 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	TULP1	O00294	542 aa	Predicted RBP	13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	FAM189A1	O60320	539 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	ECI2	O75521	394 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	ADRB2	P07550	413 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	DCN	P07585	359 aa	Known RBP	13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	CEBPB	P17676	345 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	NBL1	P41271	181 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	ACOT2	P49753	483 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	TWF1	Q12792	350 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	SNW1	Q13573	536 aa	Known RBP	13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	TMEM132D	Q14C87	1099 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	SLC5A9	Q2M3M2	681 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	SLC44A4	Q53GD3	710 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	JADE1	Q6IE81	842 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	ARMCX5	Q6P1M9	558 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	FAM173B	Q6P4H8	233 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	SLC39A4	Q6P5W5	647 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	RNF19B	Q6ZMZ0	732 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	CCDC73	Q6ZRK6	1079 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	ZNF720	Q7Z2F6	126 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	FRMD5	Q7Z6J6	570 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	TMEM130	Q8N3G9	435 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	CLIC6	Q96NY7	704 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	FIZ1	Q96SL8	496 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	ST6GALNAC4	Q9H4F1	302 aa		13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	MRPL44	Q9H9J2	332 aa	Known RBP	13.51	□□□□□ -0.25
SREBF1-215	ENST00000487401	FOXD4L1	Q9NU39	408 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 87 ms