RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 RIT2Q99578 217 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 GLT8D2Q9H1C3 349 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 OBP2AQ9NY56 170 aa12.97□□□□□ -0.33
TRIM56-204ENST00000487252 SMCO2A6NFE2 343 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 PRRG1O14668 218 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 PTGESO14684 152 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 TNFRSF10BO14763 440 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 ERLIN2O94905 339 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 TRIP6Q15654 476 aaKnown RBP12.96□□□□□ -0.33
TRIM56-204ENST00000487252 ITPRIPL2Q3MIP1 535 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 USP39Q53GS9 565 aaKnown RBP12.96□□□□□ -0.33
TRIM56-204ENST00000487252 PRR16Q569H4 304 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 PCSK4Q6UW60 755 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 B3GNT9Q6UX72 402 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-204ENST00000487252 SYT12Q8IV01 421 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 ARID3BQ8IVW6 561 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-204ENST00000487252 MB21D2Q8IYB1 491 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-204ENST00000487252 HDDC3Q8N4P3 179 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 NCOA7Q8NI08 942 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 PSPC1Q8WXF1 523 aaKnown RBP12.96□□□□□ -0.33
TRIM56-204ENST00000487252 CPB2Q96IY4 423 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 MTA3Q9BTC8 594 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 IL25Q9H293 177 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 UNC45AQ9H3U1 944 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.33
TRIM56-204ENST00000487252 KLK14Q9P0G3 267 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 INVSQ9Y283 1065 aa12.96□□□□□ -0.33
TRIM56-204ENST00000487252 EGFP01133 1207 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 ELF1P32519 619 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 ABCG1P45844 678 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 DHPSP49366 369 aaPredicted RBP12.95□□□□□ -0.34
TRIM56-204ENST00000487252 DMC1Q14565 340 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 IQCEQ6IPM2 695 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 HAUS6Q7Z4H7 955 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 RASSF3Q86WH2 238 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 PNPLA1Q8N8W4 532 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 RNF149Q8NC42 400 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 SLC5A5Q92911 643 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 ASAH2Q9NR71 780 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 KIAA1522Q9P206 1035 aaPredicted RBP12.95□□□□□ -0.34
TRIM56-204ENST00000487252 MYO9AB2RTY4 2548 aa12.95□□□□□ -0.34
TRIM56-204ENST00000487252 PLXND1Q9Y4D7 1925 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 E7EWF7 191 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 hCG_1984214I3L0E3 225 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 MSH4O15457 936 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 EDIL3O43854 480 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 OPHN1O60890 802 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 CALM1P0DP23 149 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 CALM2P0DP24 149 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 CALM3P0DP25 149 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 MYL4P12829 197 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 ARF4P18085 180 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-204ENST00000487252 RXRAP19793 462 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 TKTP29401 623 aaKnown RBP12.94□□□□□ -0.34
TRIM56-204ENST00000487252 WEE1P30291 646 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 HOXD12P35452 270 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 DGKEP52429 567 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 PTENP60484 403 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 CFHR1Q03591 330 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 CYP4F3Q08477 520 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 CAMK2BQ13554 666 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 FBXO43Q4G163 708 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 JAKMIP3Q5VZ66 844 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 TOGARAM2Q6ZUX3 1019 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 TMPRSS7Q7RTY8 843 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 RALYLQ86SE5 291 aaKnown RBP12.94□□□□□ -0.34
TRIM56-204ENST00000487252 GLRX5Q86SX6 157 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 FERMT3Q86UX7 667 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 ZNF713Q8N859 430 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-204ENST00000487252 OLIG1Q8TAK6 271 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 ZNF512Q96ME7 567 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-204ENST00000487252 CAMK1GQ96NX5 476 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 TRIM6Q9C030 488 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-204ENST00000487252 CYP4F11Q9HBI6 524 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 FBRSL1Q9HCM7 1045 aaKnown RBP12.94□□□□□ -0.34
TRIM56-204ENST00000487252 POLMQ9NP87 494 aaPredicted RBP12.94□□□□□ -0.34
TRIM56-204ENST00000487252 DIAPH3Q9NSV4 1193 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 DNAAF2Q9NVR5 837 aaKnown RBP12.94□□□□□ -0.34
TRIM56-204ENST00000487252 BARHL2Q9NY43 387 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 PILRBQ9UKJ0 227 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 ARID2Q68CP9 1835 aa12.94□□□□□ -0.34
TRIM56-204ENST00000487252 CNTNAP5Q8WYK1 1306 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 A0A1B0GUA9 196 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 OTOL1A6NHN0 477 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-204ENST00000487252 DDX11L8A8MPP1 907 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 CAPN9O14815 690 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 ADAMTS3O15072 1205 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 ASAP2O43150 1006 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 CHMP2AO43633 222 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 GJB3O75712 270 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 PSMD10O75832 226 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 DKK1O94907 266 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 NTRK1P04629 796 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 THP07101 528 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 DRD1P21728 446 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 DPP6P42658 865 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms