RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 AGPAT1Q99943 283 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 IFIH1Q9BYX4 1025 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 IMPG2Q9BZV3 1241 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 LACRTQ9GZZ8 138 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 XYLT2Q9H1B5 865 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 UNC93B1Q9H1C4 597 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 VRTNQ9H8Y1 702 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 ERVK-5Q9HDB9 667 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 LUC7LQ9NQ29 371 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 LZTFL1Q9NQ48 299 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 CHST12Q9NRB3 414 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 SNTG2Q9NY99 539 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 CNTN3Q9P232 1028 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 ADAMTS1Q9UHI8 967 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 SIX4Q9UIU6 781 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 NAGPAQ9UK23 515 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 NOCTQ9UK39 431 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 NUB1Q9Y5A7 615 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 SQORQ9Y6N5 450 aa9.24□□□□□ -0.93
NUDCD3-209ENST00000487118 VCANP13611 3396 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 A0A0U1RQG5 324 aaPredicted RBP9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 BTNL10A8MVZ5 291 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 KBTBD13C9JR72 458 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 TULP1O00294 542 aaPredicted RBP9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 DNM1LO00429 736 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 GPR182O15218 404 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 FANCGO15287 622 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 CYP26A1O43174 497 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 KRT86O43790 486 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 KIF5CO60282 957 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 RPS6KA5O75582 802 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 RECQL4O94761 1208 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 CTSHP09668 335 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 CCL5P13501 91 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 CHRNB2P17787 502 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 ATICP31939 592 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 THPOP40225 353 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 GNG11P61952 73 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 KIF5AQ12840 1032 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 TRPC3Q13507 836 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 FBXO47Q5MNV8 452 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 CCDC122Q5T0U0 273 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 SYT10Q6XYQ8 523 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 UBE2Q1Q7Z7E8 422 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 KIF18AQ8NI77 898 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 ELMO3Q96BJ8 720 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 ARID3AQ99856 593 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 NIF3L1Q9GZT8 377 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 NXF3Q9H4D5 531 aaKnown RBP9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.23□□□□□ -0.932e-6■■■■■ 71.8
NUDCD3-209ENST00000487118 STARD7Q9NQZ5 370 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 TRMT13Q9NUP7 481 aaKnown RBP9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 TRIM10Q9UDY6 481 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 ITGA11Q9UKX5 1188 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 OGDHLQ9ULD0 1010 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 INTUQ9ULD6 942 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 ST3GAL5Q9UNP4 418 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 TFR2Q9UP52 801 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 PAXBP1Q9Y5B6 917 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 UMODL1Q5DID0 1318 aa9.23□□□□□ -0.93
NUDCD3-209ENST00000487118 ARVCFO00192 962 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 SGPL1O95470 568 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 KCNE1P15382 129 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 CYP11B1P15538 503 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 TNFAIP3P21580 790 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 CDK7P50613 346 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 ZNF132P52740 706 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 YARSP54577 528 aaKnown RBP9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 BPIFB4P59827 614 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 DSC3Q14574 896 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 ZNF699Q32M78 642 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 GPR153Q6NV75 609 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 ALKBH5Q6P6C2 394 aaKnown RBP9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 TRAF7Q6Q0C0 670 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 NOP9Q86U38 636 aaKnown RBP9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 ZNF677Q86XU0 584 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 USP38Q8NB14 1042 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 SMG8Q8ND04 991 aaKnown RBP9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 SLC20A1Q8WUM9 679 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 DDX1Q92499 740 aaKnown RBP9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 KIF12Q96FN5 646 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 ZMAT2Q96NC0 199 aaKnown RBP9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 WDR24Q96S15 920 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 HTATIP2Q9BUP3 242 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 TRAIPQ9BWF2 469 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 BCO2Q9BYV7 579 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 TRIM6Q9C030 488 aaPredicted RBP9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 RNF208Q9H0X6 261 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 AGO3Q9H9G7 860 aaKnown RBP9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 DPP3Q9NY33 737 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 DNAI1Q9UI46 699 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 NOD1Q9Y239 953 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 IPPQ9Y573 584 aa9.22□□□□□ -0.93
NUDCD3-209ENST00000487118 PDCD11Q14690 1871 aaKnown RBP9.21□□□□□ -0.93
NUDCD3-209ENST00000487118 CACNA1AO00555 2505 aa9.21□□□□□ -0.94
NUDCD3-209ENST00000487118 ITGB3P05106 788 aa9.21□□□□□ -0.94
NUDCD3-209ENST00000487118 H2AFZP0C0S5 128 aa9.21□□□□□ -0.94
NUDCD3-209ENST00000487118 KRT5P13647 590 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms