RNA–Protein interactions for RNA: ENST00000487006.2

BUD23-217, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-217ENST00000487006 MBTPS2O43462 519 aa23.3■■□□□ 1.32
BUD23-217ENST00000487006 TRAPPC3O43617 180 aa23.3■■□□□ 1.32
BUD23-217ENST00000487006 ADH1AP07327 375 aa23.3■■□□□ 1.32
BUD23-217ENST00000487006 SMAD4Q13485 552 aaKnown RBP23.3■■□□□ 1.32
BUD23-217ENST00000487006 KCNB1Q14721 858 aa23.3■■□□□ 1.32
BUD23-217ENST00000487006 C9orf57Q5W0N0 161 aa23.3■■□□□ 1.32
BUD23-217ENST00000487006 FEZF2Q8TBJ5 459 aa23.3■■□□□ 1.32
BUD23-217ENST00000487006 COL25A1Q9BXS0 654 aaPredicted RBP23.3■■□□□ 1.32
BUD23-217ENST00000487006 KCTD10Q9H3F6 313 aa23.3■■□□□ 1.32
BUD23-217ENST00000487006 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.3■■□□□ 1.32
BUD23-217ENST00000487006 CDH22Q9UJ99 828 aa23.3■■□□□ 1.32
BUD23-217ENST00000487006 MAPK8IP1Q9UQF2 711 aa23.3■■□□□ 1.32
BUD23-217ENST00000487006 C5orf42Q9H799 3197 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 ADAM12O43184 909 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 TFAMQ00059 246 aaKnown RBP23.29■■□□□ 1.32
BUD23-217ENST00000487006 LMBRD2Q68DH5 695 aaPredicted RBP23.29■■□□□ 1.32
BUD23-217ENST00000487006 PPFIBP1Q86W92 1011 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 PALB2Q86YC2 1186 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 GPR65Q8IYL9 337 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 SMYD4Q8IYR2 804 aaPredicted RBP23.29■■□□□ 1.32
BUD23-217ENST00000487006 C12orf76Q8N812 135 aaPredicted RBP23.29■■□□□ 1.32
BUD23-217ENST00000487006 RDH13Q8NBN7 331 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 SUSD3Q96L08 255 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 FBXL18Q96ME1 805 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 TIGD1Q96MW7 591 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 IPO9Q96P70 1041 aaKnown RBP23.29■■□□□ 1.32
BUD23-217ENST00000487006 CLSTN3Q9BQT9 956 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 DPP3Q9NY33 737 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 FNIP2Q9P278 1114 aa23.29■■□□□ 1.32
BUD23-217ENST00000487006 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.29■■□□□ 1.32
BUD23-217ENST00000487006 ZNF233A6NK53 670 aa23.28■■□□□ 1.32
BUD23-217ENST00000487006 KINO60870 393 aaKnown RBP23.28■■□□□ 1.32
BUD23-217ENST00000487006 SPATA31D3P0C874 917 aa23.28■■□□□ 1.32
BUD23-217ENST00000487006 SNRPFP62306 86 aaKnown RBP23.28■■□□□ 1.32
BUD23-217ENST00000487006 SNRNP35Q16560 246 aaKnown RBP23.28■■□□□ 1.32
BUD23-217ENST00000487006 RSPO2Q6UXX9 243 aaPredicted RBP23.28■■□□□ 1.32
BUD23-217ENST00000487006 SPATA31D4Q6ZUB0 917 aa23.28■■□□□ 1.32
BUD23-217ENST00000487006 C12orf56Q8IXR9 622 aa23.28■■□□□ 1.32
BUD23-217ENST00000487006 XXYLT1Q8NBI6 393 aa23.28■■□□□ 1.32
BUD23-217ENST00000487006 S1PR5Q9H228 398 aa23.28■■□□□ 1.32
BUD23-217ENST00000487006 USP15Q9Y4E8 981 aaPredicted RBP23.28■■□□□ 1.32
BUD23-217ENST00000487006 TSC2P49815 1807 aa23.28■■□□□ 1.32
BUD23-217ENST00000487006 PTPRJQ12913 1337 aa23.28■■□□□ 1.32
BUD23-217ENST00000487006 C2orf16Q68DN1 1984 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 ANO9A1A5B4 782 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 PIRO00625 290 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 SPTLC1O15269 473 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 PRPF40AO75400 957 aaKnown RBP23.27■■□□□ 1.32
BUD23-217ENST00000487006 GLUD1P00367 558 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 AARSP49588 968 aaKnown RBP eCLIP23.27■■□□□ 1.32
BUD23-217ENST00000487006 CREMQ03060 361 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 PUS10Q3MIT2 529 aaKnown RBP23.27■■□□□ 1.32
BUD23-217ENST00000487006 VARS2Q5ST30 1063 aaKnown RBP23.27■■□□□ 1.32
BUD23-217ENST00000487006 SCARA3Q6AZY7 606 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 MAN1C1Q9NR34 630 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 CGNQ9P2M7 1197 aaKnown RBP23.27■■□□□ 1.32
BUD23-217ENST00000487006 MTRRQ9UBK8 725 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 PCDHA5Q9Y5H7 936 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 BDP1A6H8Y1 2624 aa23.27■■□□□ 1.32
BUD23-217ENST00000487006 SYN3O14994 580 aa23.26■■□□□ 1.31
BUD23-217ENST00000487006 TGM5O43548 720 aa23.26■■□□□ 1.31
BUD23-217ENST00000487006 UBE2HP62256 183 aa23.26■■□□□ 1.31
BUD23-217ENST00000487006 RARS2Q5T160 578 aaKnown RBP23.26■■□□□ 1.31
BUD23-217ENST00000487006 NT5DC4Q86YG4 428 aa23.26■■□□□ 1.31
BUD23-217ENST00000487006 GOLGA5Q8TBA6 731 aa23.26■■□□□ 1.31
BUD23-217ENST00000487006 UHRF1Q96T88 793 aaPredicted RBP23.26■■□□□ 1.31
BUD23-217ENST00000487006 MTMR12Q9C0I1 747 aa23.26■■□□□ 1.31
BUD23-217ENST00000487006 KIAA1586Q9HCI6 787 aa23.26■■□□□ 1.31
BUD23-217ENST00000487006 DZANK1Q9NVP4 752 aa23.26■■□□□ 1.31
BUD23-217ENST00000487006 PCDHB8Q9UN66 801 aa23.26■■□□□ 1.31
BUD23-217ENST00000487006 TIMM13Q9Y5L4 95 aaPredicted RBP23.26■■□□□ 1.31
BUD23-217ENST00000487006 M0QZQ0 153 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 EXOC3O60645 756 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 WEE2P0C1S8 567 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 HOXB8P17481 243 aaPredicted RBP23.25■■□□□ 1.31
BUD23-217ENST00000487006 LILRA4P59901 499 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 SMAD2Q15796 467 aaKnown RBP23.25■■□□□ 1.31
BUD23-217ENST00000487006 PDXDC1Q6P996 788 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 ANKS3Q6ZW76 656 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 C1orf127Q8N9H9 656 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 OR5B17Q8NGF7 314 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 SMARCE1Q969G3 411 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 CDY1Q9Y6F8 540 aa23.25■■□□□ 1.31
BUD23-217ENST00000487006 SPDYE4A6NLX3 237 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 PDXKO00764 312 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 SMC2O95347 1197 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 NR3C1P04150 777 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 ITGB3P05106 788 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 POLR2BP30876 1174 aaKnown RBP23.24■■□□□ 1.31
BUD23-217ENST00000487006 OR1D2P34982 312 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 CYP24A1Q07973 514 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 LILRA6Q6PI73 481 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 DSTYKQ6XUX3 929 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 GUF1Q8N442 669 aaKnown RBP23.24■■□□□ 1.31
BUD23-217ENST00000487006 SPATA20Q8TB22 786 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 CCDC127Q96BQ5 260 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 DMAC2Q9NW81 257 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 RMND1Q9NWS8 449 aa23.24■■□□□ 1.31
BUD23-217ENST00000487006 HOOK1Q9UJC3 728 aaKnown RBP23.24■■□□□ 1.31
BUD23-217ENST00000487006 BACE2Q9Y5Z0 518 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms