RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 GMEB2Q9UKD1 530 aa21.94■■□□□ 1.1
PHF1-208ENST00000486845 CDV3Q9UKY7 258 aaKnown RBP21.94■■□□□ 1.1
PHF1-208ENST00000486845 COL4A2P08572 1712 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 PSMC3P17980 439 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 CCR2P41597 374 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 TRAPPC10P48553 1259 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 ST3GAL1Q11201 340 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 MPZL3Q6UWV2 235 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 LEMD2Q8NC56 503 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 APPL2Q8NEU8 664 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 SNX29Q8TEQ0 813 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 DEPDC1BQ8WUY9 529 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 SUSD3Q96L08 255 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 DRC1Q96MC2 740 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 ZNF512Q96ME7 567 aaPredicted RBP21.93■■□□□ 1.1
PHF1-208ENST00000486845 RAB34Q9BZG1 259 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 ARHGAP28Q9P2N2 729 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 AFF4Q9UHB7 1163 aaKnown RBP21.93■■□□□ 1.1
PHF1-208ENST00000486845 RAB23Q9ULC3 237 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 USP18Q9UMW8 372 aa21.93■■□□□ 1.1
PHF1-208ENST00000486845 NOL7Q9UMY1 257 aaKnown RBP21.93■■□□□ 1.1
PHF1-208ENST00000486845 RBM19Q9Y4C8 960 aaKnown RBP21.93■■□□□ 1.1
PHF1-208ENST00000486845 HIP1RO75146 1068 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 PROZP22891 400 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 GDI1P31150 447 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 MCM4P33991 863 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 ATXN1P54253 815 aaKnown RBP21.92■■□□□ 1.1
PHF1-208ENST00000486845 GNL2Q13823 731 aaKnown RBP21.92■■□□□ 1.1
PHF1-208ENST00000486845 PDIA5Q14554 519 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 VITQ6UXI7 678 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 TAS1R3Q7RTX0 852 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 MAP4K3Q8IVH8 894 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 DAW1Q8N136 415 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 FAM3CQ92520 227 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 C18orf25Q96B23 403 aaPredicted RBP21.92■■□□□ 1.1
PHF1-208ENST00000486845 ZNF334Q9HCZ1 680 aaPredicted RBP21.92■■□□□ 1.1
PHF1-208ENST00000486845 KMT5AQ9NQR1 393 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 ASAH2Q9NR71 780 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 DNM3Q9UQ16 869 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 PIAS3Q9Y6X2 628 aa21.92■■□□□ 1.1
PHF1-208ENST00000486845 SPTBN2O15020 2390 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 TICRRQ7Z2Z1 1910 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 TDGF1P13385 188 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 CCR3P51677 355 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 TWF1Q12792 350 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 HS6ST3Q8IZP7 471 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 C4orf32Q8N8J7 132 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 DDX12PQ92771 950 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 C17orf75Q9HAS0 396 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 TRPV4Q9HBA0 871 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 CEP72Q9P209 647 aa21.91■■□□□ 1.1
PHF1-208ENST00000486845 TPRP12270 2363 aaKnown RBP21.9■■□□□ 1.1
PHF1-208ENST00000486845 ABLIM1O14639 778 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 ZNF263O14978 683 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 HARSP12081 509 aaKnown RBP21.9■■□□□ 1.1
PHF1-208ENST00000486845 MYL4P12829 197 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 CPB1P15086 417 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 EPHA5P54756 1037 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 IGSF22Q8N9C0 903 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 ZSCAN18Q8TBC5 510 aaPredicted RBP21.9■■□□□ 1.1
PHF1-208ENST00000486845 ZSWIM3Q96MP5 696 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 TBC1D32Q96NH3 1257 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 LLPHQ9BRT6 129 aaKnown RBP21.9■■□□□ 1.1
PHF1-208ENST00000486845 RTKNQ9BST9 563 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 LMAN1LQ9HAT1 526 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 PCDHB8Q9UN66 801 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 CACNA1BQ00975 2339 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 EPG5Q9HCE0 2579 aa21.9■■□□□ 1.1
PHF1-208ENST00000486845 E9PMD0 336 aa21.89■■□□□ 1.09
PHF1-208ENST00000486845 NRG2O14511 850 aaPredicted RBP21.89■■□□□ 1.09
PHF1-208ENST00000486845 MOSPD3O75425 235 aa21.89■■□□□ 1.09
PHF1-208ENST00000486845 TGM1P22735 817 aa21.89■■□□□ 1.09
PHF1-208ENST00000486845 MARCKSP29966 332 aaPredicted RBP21.89■■□□□ 1.09
PHF1-208ENST00000486845 VIPR2P41587 438 aa21.89■■□□□ 1.09
PHF1-208ENST00000486845 LAIR1Q6GTX8 287 aa21.89■■□□□ 1.09
PHF1-208ENST00000486845 MFSD6LQ8IWD5 586 aa21.89■■□□□ 1.09
PHF1-208ENST00000486845 CELF5Q8N6W0 485 aaKnown RBP21.89■■□□□ 1.09
PHF1-208ENST00000486845 FBXO18Q8NFZ0 1043 aa21.89■■□□□ 1.09
PHF1-208ENST00000486845 E2F7Q96AV8 911 aa21.89■■□□□ 1.09
PHF1-208ENST00000486845 GPR88Q9GZN0 384 aa21.89■■□□□ 1.09
PHF1-208ENST00000486845 PDCD11Q14690 1871 aaKnown RBP21.89■■□□□ 1.09
PHF1-208ENST00000486845 EIF5BO60841 1220 aaKnown RBP21.88■■□□□ 1.09
PHF1-208ENST00000486845 STRN3Q13033 797 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 MAPK7Q13164 816 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 NBR1Q14596 966 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 NOLC1Q14978 699 aaKnown RBP eCLIP21.88■■□□□ 1.099e-9■□□□□ 9.2
PHF1-208ENST00000486845 KRT79Q5XKE5 535 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 RNF19BQ6ZMZ0 732 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 CCDC83Q8IWF9 413 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 MSANTD3Q96H12 275 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 RUSC1Q9BVN2 902 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 TIPINQ9BVW5 301 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 OXCT2Q9BYC2 517 aaPredicted RBP21.88■■□□□ 1.09
PHF1-208ENST00000486845 SLITRK6Q9H5Y7 841 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 PARD6AQ9NPB6 346 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 ANKFY1Q9P2R3 1169 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 LIMCH1Q9UPQ0 1083 aa21.88■■□□□ 1.09
PHF1-208ENST00000486845 SLC16A4O15374 487 aa21.87■■□□□ 1.09
PHF1-208ENST00000486845 MEFVO15553 781 aaPredicted RBP21.87■■□□□ 1.09
PHF1-208ENST00000486845 TOM1L1O75674 476 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms