RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 SPIRE2Q8WWL2 714 aa20.5■□□□□ 0.87
GMDS-205ENST00000486793 ZSWIM3Q96MP5 696 aa20.5■□□□□ 0.87
GMDS-205ENST00000486793 TBC1D32Q96NH3 1257 aa20.5■□□□□ 0.87
GMDS-205ENST00000486793 ZFP14Q9HCL3 533 aa20.5■□□□□ 0.87
GMDS-205ENST00000486793 COL4A3Q01955 1670 aa20.5■□□□□ 0.87
GMDS-205ENST00000486793 TOM1L1O75674 476 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 GUCY2CP25092 1073 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 PRPHP41219 470 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 ADCY1Q08828 1119 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 STRN3Q13033 797 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 GRM2Q14416 872 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 CYP4A22Q5TCH4 519 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 PDZD4Q76G19 769 aaPredicted RBP20.49■□□□□ 0.87
GMDS-205ENST00000486793 HS6ST3Q8IZP7 471 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 TMEM130Q8N3G9 435 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 TMEM161BQ8NDZ6 487 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 APPL2Q8NEU8 664 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 ATRIPQ8WXE1 791 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 DDX12PQ92771 950 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 BORCS6Q96GS4 357 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 TIPINQ9BVW5 301 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.49■□□□□ 0.87
GMDS-205ENST00000486793 CEP72Q9P209 647 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 ANKFY1Q9P2R3 1169 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 AFF4Q9UHB7 1163 aaKnown RBP20.49■□□□□ 0.87
GMDS-205ENST00000486793 MRPS17Q9Y2R5 130 aaKnown RBP20.49■□□□□ 0.87
GMDS-205ENST00000486793 CACNA1IQ9P0X4 2223 aa20.49■□□□□ 0.87
GMDS-205ENST00000486793 PLS3P13797 630 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 MARCKSP29966 332 aaPredicted RBP20.48■□□□□ 0.87
GMDS-205ENST00000486793 MCM4P33991 863 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 RPS9P46781 194 aaKnown RBP20.48■□□□□ 0.87
GMDS-205ENST00000486793 IQCEQ6IPM2 695 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 ZNF280DQ6N043 979 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 TSSK4Q6SA08 328 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 DGLUCYQ7Z3D6 616 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 DNASE1L2Q92874 299 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 ZNF512Q96ME7 567 aaPredicted RBP20.48■□□□□ 0.87
GMDS-205ENST00000486793 ASB16Q96NS5 453 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 PLIN2Q99541 437 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 KIF2CQ99661 725 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 TRMT61BQ9BVS5 477 aaKnown RBP20.48■□□□□ 0.87
GMDS-205ENST00000486793 BRD9Q9H8M2 597 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 TUBGCP4Q9UGJ1 667 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 KCNG1Q9UIX4 513 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 PCDHGA2Q9Y5H1 932 aa20.48■□□□□ 0.87
GMDS-205ENST00000486793 SPTLC1O15269 473 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 CLDN3O15551 220 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 MOSPD3O75425 235 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 MAPTP10636 758 aaKnown RBP20.47■□□□□ 0.87
GMDS-205ENST00000486793 SMTNP53814 917 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 SPAG1Q07617 926 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 TWF1Q12792 350 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 NOLC1Q14978 699 aaKnown RBP eCLIP20.47■□□□□ 0.87
GMDS-205ENST00000486793 ZPBP2Q6X784 338 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 RNF19BQ6ZMZ0 732 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 ELMOD1Q8N336 334 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 SYT2Q8N9I0 419 aaPredicted RBP20.47■□□□□ 0.87
GMDS-205ENST00000486793 ZBTB44Q8NCP5 570 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 SMARCD2Q92925 531 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 PNMA5Q96PV4 448 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 ZSCAN32Q9NX65 697 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 MAFFQ9ULX9 164 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 PCDHB8Q9UN66 801 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 VWA8A3KMH1 1905 aa20.47■□□□□ 0.87
GMDS-205ENST00000486793 GJA1P17302 382 aa20.46■□□□□ 0.87
GMDS-205ENST00000486793 VIPR2P41587 438 aa20.46■□□□□ 0.87
GMDS-205ENST00000486793 MCL1Q07820 350 aa20.46■□□□□ 0.87
GMDS-205ENST00000486793 MTAPQ13126 283 aa20.46■□□□□ 0.87
GMDS-205ENST00000486793 PUM1Q14671 1186 aaKnown RBP eCLIP20.46■□□□□ 0.87
GMDS-205ENST00000486793 ZNF687Q8N1G0 1237 aa20.46■□□□□ 0.87
GMDS-205ENST00000486793 NELL1Q92832 810 aa20.46■□□□□ 0.87
GMDS-205ENST00000486793 HAPLN2Q9GZV7 340 aa20.46■□□□□ 0.87
GMDS-205ENST00000486793 NDRG2Q9UN36 371 aaKnown RBP20.46■□□□□ 0.87
GMDS-205ENST00000486793 TIMM13Q9Y5L4 95 aaPredicted RBP20.46■□□□□ 0.87
GMDS-205ENST00000486793 CEP250Q9BV73 2442 aa20.46■□□□□ 0.87
GMDS-205ENST00000486793 NPHP3-ACAD11A0A0J9YXS1 232 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 MED19A0JLT2 244 aaPredicted RBP20.45■□□□□ 0.86
GMDS-205ENST00000486793 MAN2B1O00754 1011 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 CXCL8P10145 99 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 MYL4P12829 197 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 CPB1P15086 417 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 PSMC3P17980 439 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 GDI1P31150 447 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 HYIQ5T013 277 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 ERICH6BQ5W0A0 696 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 VITQ6UXI7 678 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 MAP4K3Q8IVH8 894 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 IRF7Q92985 503 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 PLEKHA5Q9HAU0 1116 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 ZNF334Q9HCZ1 680 aaPredicted RBP20.45■□□□□ 0.86
GMDS-205ENST00000486793 DLL3Q9NYJ7 618 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 NCDNQ9UBB6 729 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 NCOR2Q9Y618 2525 aa20.45■□□□□ 0.86
GMDS-205ENST00000486793 NOTCH4Q99466 2003 aa20.44■□□□□ 0.86
GMDS-205ENST00000486793 M0QZQ0 153 aa20.44■□□□□ 0.86
GMDS-205ENST00000486793 OAZ2O95190 189 aa20.44■□□□□ 0.86
GMDS-205ENST00000486793 CLTAP09496 248 aa20.44■□□□□ 0.86
GMDS-205ENST00000486793 PLA2G4BP0C869 781 aa20.44■□□□□ 0.86
GMDS-205ENST00000486793 MATR3P43243 847 aaKnown RBP eCLIP20.44■□□□□ 0.863e-9■□□□□ 9.9
GMDS-205ENST00000486793 EPHA5P54756 1037 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms