RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ANGPTL2Q9UKU9 493 aa11.27□□□□□ -0.6
CCDC171-208ENST00000486641 ATF5Q9Y2D1 282 aaPredicted RBP11.27□□□□□ -0.6
CCDC171-208ENST00000486641 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 USP17L18D6R9N7 530 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 USP17L22D6RA61 530 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 USP17L19D6RCP7 530 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 USP17L20D6RJB6 530 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 SLC26A4O43511 780 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 ZBED4O75132 1171 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 TBCAO75347 108 aaKnown RBP11.27□□□□□ -0.61
CCDC171-208ENST00000486641 CYP1A2P05177 515 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 SETSIPP0DME0 302 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 PLS3P13797 630 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 ADRA1DP25100 572 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 RPA1P27694 616 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 CRABP2P29373 138 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 MAN1A1P33908 653 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 USP17L24Q0WX57 530 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 GRIK5Q16478 980 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 PCNX4Q63HM2 1172 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
CCDC171-208ENST00000486641 USP17L6PQ6QN14 398 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 CAPN12Q6ZSI9 719 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 LRRC47Q8N1G4 583 aaKnown RBP11.27□□□□□ -0.61
CCDC171-208ENST00000486641 TTC25Q96NG3 672 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 C12orf65Q9H3J6 166 aaKnown RBP11.27□□□□□ -0.61
CCDC171-208ENST00000486641 KCNK13Q9HB14 408 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 PCDHGA4Q9Y5G9 962 aa11.27□□□□□ -0.61
CCDC171-208ENST00000486641 ASLP04424 464 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 PABPC4LP0CB38 370 aaKnown RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 RARBP10826 455 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 KRT4P19013 534 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 GRIA2P42262 883 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ARFIP2P53365 341 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 BPIFB4P59827 614 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 DEUP1Q05D60 604 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 CFAP157Q5JU67 520 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 NOP9Q86U38 636 aaKnown RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 KAT5Q92993 513 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 SKA1Q96BD8 255 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ZNF653Q96CK0 615 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 FAM161BQ96MY7 647 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 OLFM3Q96PB7 478 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 MKNK1Q9BUB5 465 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 PLVAPQ9BX97 442 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 HEMGNQ9BXL5 484 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 EBF3Q9H4W6 596 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 IL1RAPL1Q9NZN1 696 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 BLOC1S6Q9UL45 172 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 FRMD4BQ9Y2L6 1034 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 C2orf71A6NGG8 1288 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 DNAJC6O75061 913 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 GZMAP12544 262 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 CPA2P48052 419 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 NOVP48745 357 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 RAP1GDS1P52306 607 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 EIF6P56537 245 aaKnown RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 DLG4P78352 724 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ZBTB16Q05516 673 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 FASTKD3Q14CZ7 662 aaKnown RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 TTBK2Q6IQ55 1244 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 PPP1R18Q6NYC8 613 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 CEP128Q6ZU80 1094 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ANKS1BQ7Z6G8 1248 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 TTC7BQ86TV6 843 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 CADPS2Q86UW7 1296 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 SPATA24Q86W54 205 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 LRRC6Q86X45 466 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ST13P4Q8IZP2 240 aaPredicted RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ZCCHC9Q8N567 271 aaKnown RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 MYCT1Q8N699 235 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ZNF513Q8N8E2 541 aaPredicted RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 BBOF1Q8ND07 529 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 PPP2R3CQ969Q6 453 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 RBM17Q96I25 401 aaKnown RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 TRIM55Q9BYV6 548 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 MIS12Q9H081 205 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ALG13Q9NP73 1137 aaKnown RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ARHGEF4Q9NR80 690 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 OLFML3Q9NRN5 406 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 RHBDL2Q9NX52 303 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 SENP1Q9P0U3 644 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 ZNF510Q9Y2H8 683 aa11.26□□□□□ -0.61
CCDC171-208ENST00000486641 DDX60LQ5H9U9 1706 aaKnown RBP11.26□□□□□ -0.61
CCDC171-208ENST00000486641 hCG_2014768A0A024R1R8 64 aa11.25□□□□□ -0.61
CCDC171-208ENST00000486641 F8W8V4 182 aa11.25□□□□□ -0.61
CCDC171-208ENST00000486641 USP1O94782 785 aa11.25□□□□□ -0.61
CCDC171-208ENST00000486641 BAG2O95816 211 aa11.25□□□□□ -0.61
CCDC171-208ENST00000486641 VAV1P15498 845 aa11.25□□□□□ -0.61
CCDC171-208ENST00000486641 ADSSP30520 456 aa11.25□□□□□ -0.61
CCDC171-208ENST00000486641 SLC16A2P36021 539 aa11.25□□□□□ -0.61
CCDC171-208ENST00000486641 EVA1CP58658 441 aa11.25□□□□□ -0.61
CCDC171-208ENST00000486641 CDK16Q00536 496 aa11.25□□□□□ -0.61
CCDC171-208ENST00000486641 CDC16Q13042 620 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms