RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ST3GAL5Q9UNP4 418 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 NOC2LQ9Y3T9 749 aaKnown RBP7.57□□□□□ -1.2
HDAC3-209ENST00000486618 HCFC2Q9Y5Z7 792 aa7.57□□□□□ -1.2
HDAC3-209ENST00000486618 CEP250Q9BV73 2442 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 MGEA5O60502 916 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 ASGR2P07307 311 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 FGFR1P11362 822 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 ZSCAN20P17040 1043 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-209ENST00000486618 AOC1P19801 751 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 CA8P35219 290 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 GNAQP50148 359 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 CRYBB1P53674 252 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-209ENST00000486618 ACTR2P61160 394 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 GIT2Q14161 759 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 DOC2BQ14184 412 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 SIM2Q14190 667 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-209ENST00000486618 ANGPT1Q15389 498 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 INO80DQ53TQ3 878 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-209ENST00000486618 C10orf62Q5T681 223 aaPredicted RBP7.56□□□□□ -1.2
HDAC3-209ENST00000486618 FAM160B1Q5W0V3 765 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 KIAA1841Q6NSI8 718 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 DGLUCYQ7Z3D6 616 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 CCDC105Q8IYK2 499 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 LRRC43Q8N309 656 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 KIAA1958Q8N8K9 716 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 ATRIPQ8WXE1 791 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 MAP3K14Q99558 947 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 SPZ1Q9BXG8 430 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 PPCSQ9HAB8 311 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 CYP26B1Q9NR63 512 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 PARP2Q9UGN5 583 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 FBXL21Q9UKT6 434 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 INTUQ9ULD6 942 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 TMCC3Q9ULS5 477 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 MYH9P35579 1960 aaKnown RBP7.56□□□□□ -1.2
HDAC3-209ENST00000486618 COL1A2P08123 1366 aa7.56□□□□□ -1.2
HDAC3-209ENST00000486618 NFASCO94856 1347 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 C2orf71A6NGG8 1288 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 KIF1CO43896 1103 aaKnown RBP7.55□□□□□ -1.2
HDAC3-209ENST00000486618 CLASP2O75122 1294 aaKnown RBP7.55□□□□□ -1.2
HDAC3-209ENST00000486618 CXCL14O95715 111 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 EOMESO95936 686 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 LMNAP02545 664 aaKnown RBP7.55□□□□□ -1.2
HDAC3-209ENST00000486618 RPN1P04843 607 aaKnown RBP7.55□□□□□ -1.2
HDAC3-209ENST00000486618 HNRNPCP07910 306 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC3-209ENST00000486618 MAPK1P28482 360 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 ALDH7A1P49419 539 aaKnown RBP7.55□□□□□ -1.2
HDAC3-209ENST00000486618 ZNF131P52739 623 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 NRLP54845 237 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 SLC20A2Q08357 652 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 PUM1Q14671 1186 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC3-209ENST00000486618 TRIP4Q15650 581 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-209ENST00000486618 ZNF484Q5JVG2 852 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 RARS2Q5T160 578 aaKnown RBP7.55□□□□□ -1.2
HDAC3-209ENST00000486618 OTOP3Q7RTS5 596 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 KIAA0319LQ8IZA0 1049 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 DTWD2Q8NBA8 298 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 NCOA7Q8NI08 942 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 TMEM169Q96HH4 297 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 NACC1Q96RE7 527 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 MXRA8Q9BRK3 442 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 SMOC2Q9H3U7 446 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 KCNH7Q9NS40 1196 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 PCDHA6Q9UN73 950 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 PCDHA8Q9Y5H6 950 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 ZNF292O60281 2723 aa7.55□□□□□ -1.2
HDAC3-209ENST00000486618 EPG5Q9HCE0 2579 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 OTOGLQ3ZCN5 2332 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 A0A1W2PRQ8 180 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 TRIM64CA6NLI5 447 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 SLC26A4O43511 780 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 DDAH1O94760 285 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 WEE2P0C1S8 567 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 NAT1P18440 290 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 PLAURQ03405 335 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 IFT88Q13099 833 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 TDGQ13569 410 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 DSC3Q14574 896 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 NONOQ15233 471 aaKnown RBP eCLIP7.54□□□□□ -1.2
HDAC3-209ENST00000486618 KIZQ2M2Z5 673 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 FAM133BQ5BKY9 247 aaKnown RBP7.54□□□□□ -1.2
HDAC3-209ENST00000486618 ZC3H12AQ5D1E8 599 aaKnown RBP7.54□□□□□ -1.2
HDAC3-209ENST00000486618 CWF19L1Q69YN2 538 aaKnown RBP7.54□□□□□ -1.2
HDAC3-209ENST00000486618 PDXDC1Q6P996 788 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 ELMSAN1Q6PJG2 1045 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 ZC3H14Q6PJT7 736 aaKnown RBP7.54□□□□□ -1.2
HDAC3-209ENST00000486618 LRRC55Q6ZSA7 311 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 CCDC149Q6ZUS6 474 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 FAM228AQ86W67 206 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 DMRTC2Q8IXT2 367 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-209ENST00000486618 SMAP1Q8IYB5 467 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-209ENST00000486618 SLC39A11Q8N1S5 342 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 TMEM40Q8WWA1 233 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 RMDN1Q96DB5 314 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 CCDC34Q96HJ3 373 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 CASD1Q96PB1 797 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 OSMRQ99650 979 aa7.54□□□□□ -1.2
HDAC3-209ENST00000486618 MRPL9Q9BYD2 267 aaKnown RBP7.54□□□□□ -1.2
HDAC3-209ENST00000486618 C22orf23Q9BZE7 217 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms