RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 KCNB1Q14721 858 aa19.72■□□□□ 0.75
COL1A1-207ENST00000486572 ANKS3Q6ZW76 656 aa19.72■□□□□ 0.75
COL1A1-207ENST00000486572 GLYCTKQ8IVS8 523 aa19.72■□□□□ 0.75
COL1A1-207ENST00000486572 EFCAB13Q8IY85 973 aa19.72■□□□□ 0.75
COL1A1-207ENST00000486572 GOLGA5Q8TBA6 731 aa19.72■□□□□ 0.75
COL1A1-207ENST00000486572 SUSD3Q96L08 255 aa19.72■□□□□ 0.75
COL1A1-207ENST00000486572 KIAA1586Q9HCI6 787 aa19.72■□□□□ 0.75
COL1A1-207ENST00000486572 USP15Q9Y4E8 981 aaPredicted RBP19.72■□□□□ 0.75
COL1A1-207ENST00000486572 ZNF233A6NK53 670 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 C1RP00736 705 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 WNT7BP56706 349 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 C9orf57Q5W0N0 161 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 ELMSAN1Q6PJG2 1045 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 CBWD2Q8IUF1 395 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 C12orf56Q8IXR9 622 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 TIGD1Q96MW7 591 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 NECAB3Q96P71 396 aaPredicted RBP19.71■□□□□ 0.75
COL1A1-207ENST00000486572 CLSTN3Q9BQT9 956 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 APOL5Q9BWW9 433 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 S1PR5Q9H228 398 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 SFXN1Q9H9B4 322 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 DPP3Q9NY33 737 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 MTRRQ9UBK8 725 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 DPP7Q9UHL4 492 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 TCF20Q9UGU0 1960 aaKnown RBP19.71■□□□□ 0.75
COL1A1-207ENST00000486572 VCANP13611 3396 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 PLXNA3P51805 1871 aa19.71■□□□□ 0.75
COL1A1-207ENST00000486572 TTC28Q96AY4 2481 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 ANO9A1A5B4 782 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 SPDYE4A6NLX3 237 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 TULP1O00294 542 aaPredicted RBP19.7■□□□□ 0.74
COL1A1-207ENST00000486572 DLL1O00548 723 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 PPEF2O14830 753 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 CLIC2O15247 247 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 KIF20AO95235 890 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 AARSP49588 968 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL1A1-207ENST00000486572 CYP2J2P51589 502 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 ITIH3Q06033 890 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 PNOCQ13519 176 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 SNRNP35Q16560 246 aaKnown RBP19.7■□□□□ 0.74
COL1A1-207ENST00000486572 VARS2Q5ST30 1063 aaKnown RBP19.7■□□□□ 0.74
COL1A1-207ENST00000486572 PALB2Q86YC2 1186 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 XXYLT1Q8NBI6 393 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 PDE11AQ9HCR9 933 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 MAN1C1Q9NR34 630 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 PRKAG3Q9UGI9 489 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 HOOK1Q9UJC3 728 aaKnown RBP19.7■□□□□ 0.74
COL1A1-207ENST00000486572 PCDHB8Q9UN66 801 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 BACE2Q9Y5Z0 518 aa19.7■□□□□ 0.74
COL1A1-207ENST00000486572 M0QZQ0 153 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 PIRO00625 290 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 TGM5O43548 720 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 GADD45BO75293 160 aaPredicted RBP19.69■□□□□ 0.74
COL1A1-207ENST00000486572 PAX3P23760 479 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 TFAMQ00059 246 aaKnown RBP19.69■□□□□ 0.74
COL1A1-207ENST00000486572 SURF1Q15526 300 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 RARS2Q5T160 578 aaKnown RBP19.69■□□□□ 0.74
COL1A1-207ENST00000486572 CES5AQ6NT32 575 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 APPL2Q8NEU8 664 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 CACTINQ8WUQ7 758 aaKnown RBP19.69■□□□□ 0.74
COL1A1-207ENST00000486572 SUSD6Q92537 303 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 ADAM7Q9H2U9 754 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 KCTD10Q9H3F6 313 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 RMND1Q9NWS8 449 aa19.69■□□□□ 0.74
COL1A1-207ENST00000486572 CUL9Q8IWT3 2517 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 PDXKO00764 312 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 ADAM12O43184 909 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 KINO60870 393 aaKnown RBP19.68■□□□□ 0.74
COL1A1-207ENST00000486572 OR1D2P34982 312 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 LILRA4P59901 499 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 CBX2Q14781 532 aaPredicted RBP19.68■□□□□ 0.74
COL1A1-207ENST00000486572 LILRA6Q6PI73 481 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 DSTYKQ6XUX3 929 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 C12orf76Q8N812 135 aaPredicted RBP19.68■□□□□ 0.74
COL1A1-207ENST00000486572 HDAC7Q8WUI4 952 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 PLEKHA4Q9H4M7 779 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 CDY1Q9Y6F8 540 aa19.68■□□□□ 0.74
COL1A1-207ENST00000486572 H7C4K7 107 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 EXOC3O60645 756 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 SMC2O95347 1197 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 TMEM191BP0C7N4 346 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 SPATA31D3P0C874 917 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 ZP2Q05996 745 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 RAB33AQ14088 237 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 MRPL58Q14197 206 aaKnown RBP19.67■□□□□ 0.74
COL1A1-207ENST00000486572 ZNF280DQ6N043 979 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 SPATA31D4Q6ZUB0 917 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 ADHFE1Q8IWW8 467 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 GUF1Q8N442 669 aaKnown RBP19.67■□□□□ 0.74
COL1A1-207ENST00000486572 RDH13Q8NBN7 331 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 GSDMAQ96QA5 445 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 POP1Q99575 1024 aaKnown RBP19.67■□□□□ 0.74
COL1A1-207ENST00000486572 MTMR12Q9C0I1 747 aa19.67■□□□□ 0.74
COL1A1-207ENST00000486572 SPTLC1O15269 473 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 ITGB3P05106 788 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 ODC1P11926 461 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 TAF6P49848 677 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 UBE2HP62256 183 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 YWHAHQ04917 246 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-207ENST00000486572 CYP24A1Q07973 514 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms