RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 MBOAT7Q96N66 472 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 MMS19Q96T76 1030 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 PLIN2Q99541 437 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 SH2D3AQ9BRG2 576 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 PLVAPQ9BX97 442 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 LMAN2LQ9H0V9 348 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 RASSF4Q9H2L5 321 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 SLC39A2Q9NP94 309 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 RGS18Q9NS28 235 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 AGPAT5Q9NUQ2 364 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 SIK3Q9Y2K2 1263 aa9.73□□□□□ -0.85
COL12A1-208ENST00000486533 ARIH1Q9Y4X5 557 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-208ENST00000486533 FNDC1Q4ZHG4 1894 aaPredicted RBP9.73□□□□□ -0.85
COL12A1-208ENST00000486533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 TBKBP1A7MCY6 615 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 H3BQ06 376 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 RNF225M0QZC1 329 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 ENC1O14682 589 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 EIF4BP23588 611 aaKnown RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 EIF4A3P38919 411 aaKnown RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 MARSP56192 900 aaKnown RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 TNNC1P63316 161 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 RAD51AP2Q09MP3 1159 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 EDRF1Q3B7T1 1238 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 LEXMQ3ZCV2 418 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 TDRD12Q587J7 1177 aaKnown RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 XKR3Q5GH77 459 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 C8orf74Q6P047 294 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 CCNI2Q6ZMN8 369 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 FAM43BQ6ZT52 329 aaPredicted RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 RRAGAQ7L523 313 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 LAPTM4BQ86VI4 370 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 SPATS2Q86XZ4 545 aaKnown RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 TAF4BQ92750 862 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 CAPZA3Q96KX2 299 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 OSBPL9Q96SU4 736 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 MMTAG2Q9BU76 263 aaKnown RBP9.72□□□□□ -0.85
COL12A1-208ENST00000486533 SELENOOQ9BVL4 669 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 ADAMTS10Q9H324 1103 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 FAM204AQ9H8W3 233 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 ATP6V0A4Q9HBG4 840 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 CLDND1Q9NY35 253 aa9.72□□□□□ -0.85
COL12A1-208ENST00000486533 A0A0U1RQJ8 604 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 GOLGA6CA6NDK9 693 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 MYMKA6NI61 221 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 BTNL10A8MVZ5 291 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 C9IYK1 514 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 CETN3O15182 167 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 KRT18P05783 430 aaKnown RBP9.71□□□□□ -0.85
COL12A1-208ENST00000486533 GOLGA6DP0CG33 693 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 FGFR1P11362 822 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 GPC3P51654 580 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 NAP1L1P55209 391 aaKnown RBP9.71□□□□□ -0.85
COL12A1-208ENST00000486533 PSMC5P62195 406 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 TARBP2Q15633 366 aaKnown RBP9.71□□□□□ -0.85
COL12A1-208ENST00000486533 CLUL1Q15846 466 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 FAM102BQ5T8I3 360 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 PTCRAQ6ISU1 281 aaPredicted RBP9.71□□□□□ -0.85
COL12A1-208ENST00000486533 B3GNT9Q6UX72 402 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 LINC01465Q8N7H1 131 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 EIF1ADQ8N9N8 165 aaKnown RBP9.71□□□□□ -0.85
COL12A1-208ENST00000486533 KLHL23Q8NBE8 558 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 AENQ8WTP8 325 aaKnown RBP9.71□□□□□ -0.85
COL12A1-208ENST00000486533 ATRIPQ8WXE1 791 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 CAVIN3Q969G5 261 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 PABPC5Q96DU9 382 aaKnown RBP9.71□□□□□ -0.85
COL12A1-208ENST00000486533 FAM20AQ96MK3 541 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 NIFKQ9BYG3 293 aaKnown RBP9.71□□□□□ -0.85
COL12A1-208ENST00000486533 KCNMB3Q9NPA1 279 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 BLOC1S4Q9NUP1 217 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 PANK4Q9NVE7 773 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 TMEM161AQ9NX61 479 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 GOLGA6AQ9NYA3 693 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 STIM2Q9P246 746 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 TRIM10Q9UDY6 481 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 VAV3Q9UKW4 847 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 PCDHB12Q9Y5F1 795 aa9.71□□□□□ -0.85
COL12A1-208ENST00000486533 LRRC53A6NM62 1247 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 LRRIQ3A6PVS8 624 aaPredicted RBP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 EML1O00423 815 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 TBX3O15119 743 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 CALUO43852 315 aaPredicted RBP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 CSDE1O75534 798 aaKnown RBP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 ITGB1P05556 798 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 EPB41P11171 864 aaKnown RBP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 DARSP14868 501 aaKnown RBP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 IL9P15248 144 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 FGFR4P22455 802 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 QARSP47897 775 aaKnown RBP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 COASYQ13057 564 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 PPP2R5CQ13362 524 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 DRP2Q13474 957 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 ASIC2Q16515 512 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 PLA2G4FQ68DD2 849 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 ABI1Q8IZP0 508 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 RNF169Q8NCN4 708 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 SPATA4Q8NEY3 305 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.71□□□□□ -0.86
COL12A1-208ENST00000486533 PPP2R3CQ969Q6 453 aa9.71□□□□□ -0.86
COL12A1-208ENST00000486533 CALR3Q96L12 384 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms