RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 KIF4AO95239 1232 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 TRIM16O95361 564 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 CYP21A2P08686 494 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 PRKCSHP14314 528 aaPredicted RBP9.21□□□□□ -0.94
XRN1-212ENST00000486211 PTPN2P17706 415 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 DNM2P50570 870 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 IRX4P78413 519 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 GRIK3Q13003 919 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 SART3Q15020 963 aaKnown RBP9.21□□□□□ -0.94
XRN1-212ENST00000486211 PON2Q15165 354 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 ELF2Q15723 593 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 UAP1L1Q3KQV9 507 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 RETREG3Q86VR2 466 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 RALGPS2Q86X27 583 aaPredicted RBP9.21□□□□□ -0.94
XRN1-212ENST00000486211 CEP57Q86XR8 500 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 CSGALNACT1Q8TDX6 532 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 LENG9Q96B70 501 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 APOL6Q9BWW8 343 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 POLR3BQ9NW08 1133 aaPredicted RBP9.21□□□□□ -0.94
XRN1-212ENST00000486211 MTRRQ9UBK8 725 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 RAXQ9Y2V3 346 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 GIT1Q9Y2X7 761 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 KALRNO60229 2985 aa9.21□□□□□ -0.94
XRN1-212ENST00000486211 ACACAQ13085 2346 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 CCDC194A0A1B0GVG4 234 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 UPK3BL1B0FP48 263 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 UPK3BL2E5RIL1 263 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 CHADO15335 359 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 RHOBTB1O94844 696 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 RXRAP19793 462 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 ADCY7P51828 1080 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 KPNA1P52294 538 aaPredicted RBP9.2□□□□□ -0.94
XRN1-212ENST00000486211 FAM193AP78312 1265 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 SETQ01105 290 aaPredicted RBP9.2□□□□□ -0.94
XRN1-212ENST00000486211 SPIRE1Q08AE8 756 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 FCHO2Q0JRZ9 810 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 XKR3Q5GH77 459 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 ANKRD45Q5TZF3 282 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 TMTC3Q6ZXV5 915 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 SRGAP1Q7Z6B7 1085 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 MB21D2Q8IYB1 491 aaPredicted RBP9.2□□□□□ -0.94
XRN1-212ENST00000486211 ZSCAN18Q8TBC5 510 aaPredicted RBP9.2□□□□□ -0.94
XRN1-212ENST00000486211 CRELD1Q96HD1 420 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 CORO1BQ9BR76 489 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 NXF3Q9H4D5 531 aaKnown RBP9.2□□□□□ -0.94
XRN1-212ENST00000486211 SLC32A1Q9H598 525 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 CCDC86Q9H6F5 360 aaKnown RBP9.2□□□□□ -0.94
XRN1-212ENST00000486211 TCEAL9Q9UHQ7 104 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 RAI2Q9Y5P3 530 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 COL4A3BPQ9Y5P4 624 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 ZMYM2Q9UBW7 1377 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 ZNF462Q96JM2 2506 aa9.2□□□□□ -0.94
XRN1-212ENST00000486211 HECTD1Q9ULT8 2610 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 ZNF197O14709 1029 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 TRIM66O15016 1216 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 ADAMTS3O15072 1205 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 TSPAN1O60635 241 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 FGFR3P22607 806 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 AKAP5P24588 427 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 NAPAP54920 295 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 SEMA3BQ13214 749 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 TUSC3Q13454 348 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 PMS2CLQ68D20 193 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 PDXDC1Q6P996 788 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 CCDC82Q8N4S0 544 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 CAMKK1Q8N5S9 505 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 TTC8Q8TAM2 541 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 MDM1Q8TC05 714 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 CCDC51Q96ER9 411 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 LRRC3BQ96PB8 259 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 UBL7Q96S82 380 aaPredicted RBP9.19□□□□□ -0.94
XRN1-212ENST00000486211 CSRNP2Q9H175 543 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 DIAPH3Q9NSV4 1193 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 SNTG2Q9NY99 539 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 GTSE1Q9NYZ3 720 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 EVLQ9UI08 416 aaPredicted RBP9.19□□□□□ -0.94
XRN1-212ENST00000486211 PCDHGC3Q9UN70 934 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 SLC8A2Q9UPR5 921 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 CDY1Q9Y6F8 540 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 CFAP46Q8IYW2 2715 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 PLXNB3Q9ULL4 1909 aa9.19□□□□□ -0.94
XRN1-212ENST00000486211 MYO18BQ8IUG5 2567 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 SMCO2A6NFE2 343 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 CASTOR2A6NHX0 329 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 E7EWF7 191 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 TERTO14746 1132 aaKnown RBP9.18□□□□□ -0.94
XRN1-212ENST00000486211 LRG1P02750 347 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 SRGAP2CP0DJJ0 459 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 GJA1P17302 382 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 NDUFV2P19404 249 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 IGFBP6P24592 240 aaPredicted RBP9.18□□□□□ -0.94
XRN1-212ENST00000486211 SFNP31947 248 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 CIITAP33076 1130 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 EPHA5P54756 1037 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 HNRNPUQ00839 825 aaKnown RBP eCLIP9.18□□□□□ -0.94
XRN1-212ENST00000486211 KARSQ15046 597 aaKnown RBP9.18□□□□□ -0.94
XRN1-212ENST00000486211 ZNF423Q2M1K9 1284 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 PRR16Q569H4 304 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 JAKMIP3Q5VZ66 844 aa9.18□□□□□ -0.94
XRN1-212ENST00000486211 NOTUMQ6P988 496 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms