RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 XKR4Q5GH76 650 aa15.5■□□□□ 0.07
COL9A1-207ENST00000486080 ENOSF1Q7L5Y1 443 aa15.5■□□□□ 0.07
COL9A1-207ENST00000486080 OLIG1Q8TAK6 271 aa15.5■□□□□ 0.07
COL9A1-207ENST00000486080 EIF3CQ99613 913 aaKnown RBP15.5■□□□□ 0.07
COL9A1-207ENST00000486080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL9A1-207ENST00000486080 IFIH1Q9BYX4 1025 aaKnown RBP15.5■□□□□ 0.07
COL9A1-207ENST00000486080 ITGA11Q9UKX5 1188 aa15.5■□□□□ 0.07
COL9A1-207ENST00000486080 TFR2Q9UP52 801 aa15.5■□□□□ 0.07
COL9A1-207ENST00000486080 AGAP1Q9UPQ3 857 aa15.5■□□□□ 0.07
COL9A1-207ENST00000486080 BZW2Q9Y6E2 419 aaKnown RBP15.5■□□□□ 0.07
COL9A1-207ENST00000486080 TET1Q8NFU7 2136 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 A0A087X0T9 212 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 PPEF2O14830 753 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 ZSCAN12O43309 604 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 NBNO60934 754 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 CALCAP01258 141 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 FAM228BP0C875 321 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 ITGA4P13612 1032 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 ACO1P21399 889 aaKnown RBP15.49■□□□□ 0.07
COL9A1-207ENST00000486080 AFF1P51825 1210 aaKnown RBP15.49■□□□□ 0.07
COL9A1-207ENST00000486080 FAAP100Q0VG06 881 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 MRPL10Q7Z7H8 261 aaKnown RBP15.49■□□□□ 0.07
COL9A1-207ENST00000486080 RTN4RL1Q86UN2 441 aaPredicted RBP15.49■□□□□ 0.07
COL9A1-207ENST00000486080 NXF1Q9UBU9 619 aaKnown RBP15.49■□□□□ 0.07
COL9A1-207ENST00000486080 ADAMTS1Q9UHI8 967 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 POLIQ9UNA4 740 aa15.49■□□□□ 0.07
COL9A1-207ENST00000486080 PTGESO14684 152 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 TLR3O15455 904 aaKnown RBP15.48■□□□□ 0.07
COL9A1-207ENST00000486080 ABL1P00519 1130 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 KRT5P13647 590 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 KCNE1P15382 129 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 ATF7P17544 494 aaPredicted RBP15.48■□□□□ 0.07
COL9A1-207ENST00000486080 SOX4Q06945 474 aaPredicted RBP15.48■□□□□ 0.07
COL9A1-207ENST00000486080 SCARA5Q6ZMJ2 495 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 AGMOQ6ZNB7 445 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 SLC47A2Q86VL8 602 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 RNF169Q8NCN4 708 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 SLC20A1Q8WUM9 679 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 LINC01599Q8WXQ3 324 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 HPDLQ96IR7 371 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 PAWRQ96IZ0 340 aaKnown RBP15.48■□□□□ 0.07
COL9A1-207ENST00000486080 FAM81BQ96LP2 452 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 C16orf45Q96MC5 204 aaPredicted RBP15.48■□□□□ 0.07
COL9A1-207ENST00000486080 SYT11Q9BT88 431 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 TRAIPQ9BWF2 469 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 NIF3L1Q9GZT8 377 aa15.48■□□□□ 0.07
COL9A1-207ENST00000486080 A0A0U1RQF3 1178 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 RCCD1A6NED2 376 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 DCDC2CA8MYV0 355 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 ZNF623O75123 536 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 LCA5LO95447 670 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 WEE2P0C1S8 567 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 TBXAS1P24557 533 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-207ENST00000486080 MLH1P40692 756 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 ASPAP45381 313 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 RBP5P82980 135 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 WDR72Q3MJ13 1102 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 GSTCDQ8NEC7 633 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 BEST2Q8NFU1 509 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 TAF4BQ92750 862 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 GAD1Q99259 594 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 GOLGA2P5Q9HBQ8 144 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 LZTFL1Q9NQ48 299 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 PRDM10Q9NQV6 1147 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 TANC1Q9C0D5 1861 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 CCP110O43303 1012 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 OFD1O75665 1012 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 CCDC172P0C7W6 258 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 RAB27AP51159 221 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 KRT83P78385 493 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 SPA17Q15506 151 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 SLC18A3Q16572 532 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 ZNF667Q5HYK9 610 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 NOP9Q86U38 636 aaKnown RBP15.47■□□□□ 0.07
COL9A1-207ENST00000486080 FMNL3Q8IVF7 1028 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 UBR7Q8N806 425 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 ANKLE1Q8NAG6 615 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 LNX1Q8TBB1 728 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-207ENST00000486080 SCLYQ96I15 445 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 TOX2Q96NM4 488 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 PPP1R10Q96QC0 940 aaKnown RBP15.47■□□□□ 0.07
COL9A1-207ENST00000486080 HIPK3Q9H422 1215 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 MIOSQ9NXC5 875 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 UBQLN1Q9UMX0 589 aaKnown RBP15.47■□□□□ 0.07
COL9A1-207ENST00000486080 ATP11BQ9Y2G3 1177 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 PCDHB4Q9Y5E5 795 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 PCDHA13Q9Y5I0 950 aa15.47■□□□□ 0.07
COL9A1-207ENST00000486080 ARL5CA6NH57 179 aa15.46■□□□□ 0.07
COL9A1-207ENST00000486080 DDX3XO00571 662 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL9A1-207ENST00000486080 IPO7O95373 1038 aaKnown RBP15.46■□□□□ 0.07
COL9A1-207ENST00000486080 CD58P19256 250 aa15.46■□□□□ 0.07
COL9A1-207ENST00000486080 ATICP31939 592 aa15.46■□□□□ 0.07
COL9A1-207ENST00000486080 ARHGAP25P42331 645 aa15.46■□□□□ 0.07
COL9A1-207ENST00000486080 RAP1GAPP47736 663 aa15.46■□□□□ 0.07
COL9A1-207ENST00000486080 CCL23P55773 120 aa15.46■□□□□ 0.07
COL9A1-207ENST00000486080 C1orf53Q5VUE5 145 aa15.46■□□□□ 0.07
COL9A1-207ENST00000486080 C9orf57Q5W0N0 161 aa15.46■□□□□ 0.07
COL9A1-207ENST00000486080 TMEM270Q6UE05 265 aa15.46■□□□□ 0.07
COL9A1-207ENST00000486080 NYAP1Q6ZVC0 841 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms