RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 FGFR3P22607 806 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 PAX3P23760 479 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 IGFBP6P24592 240 aaPredicted RBP13.49□□□□□ -0.25
HMG20B-211ENST00000486028 RBM10P98175 930 aaKnown RBP13.49□□□□□ -0.25
HMG20B-211ENST00000486028 CLUL1Q15846 466 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 RTP2Q5QGT7 225 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 ANKRD54Q6NXT1 300 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 ELMSAN1Q6PJG2 1045 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 NT5DC4Q86YG4 428 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 KIAA0895Q8NCT3 520 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 C3orf58Q8NDZ4 430 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 CACTINQ8WUQ7 758 aaKnown RBP13.49□□□□□ -0.25
HMG20B-211ENST00000486028 PIK3R5Q8WYR1 880 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 DZANK1Q9NVP4 752 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 RMND1Q9NWS8 449 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 DPP7Q9UHL4 492 aa13.49□□□□□ -0.25
HMG20B-211ENST00000486028 GRXCR2A6NFK2 248 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 I3L4J1 428 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 CLIC2O15247 247 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 GADD45BO75293 160 aaPredicted RBP13.48□□□□□ -0.25
HMG20B-211ENST00000486028 C1RP00736 705 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 MCM4P33991 863 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 BRCC3P46736 316 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 CYP2J2P51589 502 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 CLCN4P51793 760 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 GUCY2FP51841 1108 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 UBE2HP62256 183 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 SMAD4Q13485 552 aaKnown RBP13.48□□□□□ -0.25
HMG20B-211ENST00000486028 PNOCQ13519 176 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 SURF1Q15526 300 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 PSMD5Q16401 504 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 C9orf57Q5W0N0 161 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 PRSS55Q6UWB4 352 aaPredicted RBP13.48□□□□□ -0.25
HMG20B-211ENST00000486028 ANKS3Q6ZW76 656 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 C12orf56Q8IXR9 622 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 ELOA2Q8IYF1 753 aaPredicted RBP13.48□□□□□ -0.25
HMG20B-211ENST00000486028 XXYLT1Q8NBI6 393 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 ZSWIM2Q8NEG5 633 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 APPL2Q8NEU8 664 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 LNX1Q8TBB1 728 aaPredicted RBP13.48□□□□□ -0.25
HMG20B-211ENST00000486028 SUSD3Q96L08 255 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 FBXL18Q96ME1 805 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 GSDMAQ96QA5 445 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 SLC24A3Q9HC58 644 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 DPP3Q9NY33 737 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 TTC28Q96AY4 2481 aa13.48□□□□□ -0.25
HMG20B-211ENST00000486028 XIRP2A4UGR9 3374 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 PDXKO00764 312 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 SYN3O14994 580 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 PRPF40AO75400 957 aaKnown RBP13.47□□□□□ -0.25
HMG20B-211ENST00000486028 GLUD1P00367 558 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 EPCAMP16422 314 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 RPL17P18621 184 aaKnown RBP13.47□□□□□ -0.25
HMG20B-211ENST00000486028 TKTP29401 623 aaKnown RBP13.47□□□□□ -0.25
HMG20B-211ENST00000486028 TFAMQ00059 246 aaKnown RBP13.47□□□□□ -0.25
HMG20B-211ENST00000486028 SNRNP35Q16560 246 aaKnown RBP13.47□□□□□ -0.25
HMG20B-211ENST00000486028 SYCE2Q6PIF2 218 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 PALB2Q86YC2 1186 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 CBWD2Q8IUF1 395 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 RDH13Q8NBN7 331 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 SMRP1Q8NCR6 262 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 ADAMTS19Q8TE59 1207 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 SMARCE1Q969G3 411 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
HMG20B-211ENST00000486028 PDE11AQ9HCR9 933 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 PCDHB8Q9UN66 801 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 BACE2Q9Y5Z0 518 aa13.47□□□□□ -0.25
HMG20B-211ENST00000486028 ANO9A1A5B4 782 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 ARHGEF37A1IGU5 675 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 H7C4K7 107 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 PIRO00625 290 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 MBTPS2O43462 519 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 CALUO43852 315 aaPredicted RBP13.46□□□□□ -0.25
HMG20B-211ENST00000486028 EXOC3O60645 756 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 LILRA4P59901 499 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 MYBPC2Q14324 1141 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 DUOXA2Q1HG44 320 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
HMG20B-211ENST00000486028 CES5AQ6NT32 575 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 DSTYKQ6XUX3 929 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 SLC9A9Q8IVB4 645 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 EFCAB13Q8IY85 973 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 TMEM130Q8N3G9 435 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 GUF1Q8N442 669 aaKnown RBP13.46□□□□□ -0.25
HMG20B-211ENST00000486028 HDAC7Q8WUI4 952 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 TMEM174Q8WUU8 243 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 CLSTN3Q9BQT9 956 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 S1PR5Q9H228 398 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 KCTD10Q9H3F6 313 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 MTRRQ9UBK8 725 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 MAPK8IP1Q9UQF2 711 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 PCDHA5Q9Y5H7 936 aa13.46□□□□□ -0.25
HMG20B-211ENST00000486028 NCOR1O75376 2440 aa13.45□□□□□ -0.26
HMG20B-211ENST00000486028 M0QZQ0 153 aa13.45□□□□□ -0.26
HMG20B-211ENST00000486028 TNNC2P02585 160 aa13.45□□□□□ -0.26
HMG20B-211ENST00000486028 NR3C1P04150 777 aa13.45□□□□□ -0.26
HMG20B-211ENST00000486028 OR1D2P34982 312 aa13.45□□□□□ -0.26
HMG20B-211ENST00000486028 AARSP49588 968 aaKnown RBP eCLIP13.45□□□□□ -0.268e-6■■■■■ 52.4
HMG20B-211ENST00000486028 WNT7BP56706 349 aa13.45□□□□□ -0.26
HMG20B-211ENST00000486028 ITIH3Q06033 890 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms