RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 TARS2Q9BW92 718 aaKnown RBP18.5■□□□□ 0.55
VIM-205ENST00000485947 CDT1Q9H211 546 aa18.5■□□□□ 0.55
VIM-205ENST00000485947 ST6GALNAC4Q9H4F1 302 aa18.5■□□□□ 0.55
VIM-205ENST00000485947 PLEKHA4Q9H4M7 779 aa18.5■□□□□ 0.55
VIM-205ENST00000485947 SFI1A8K8P3 1242 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 TRAPPC3O43617 180 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 GCNT3O95395 438 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 EPCAMP16422 314 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 NCKAP1LP55160 1127 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 NHLH1Q02575 133 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 LRRC63Q05C16 580 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 CENPPQ6IPU0 288 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 DCLRE1AQ6PJP8 1040 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 ZNF507Q8TCN5 953 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 ACAP3Q96P50 834 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 TSPAN18Q96SJ8 248 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 GPR62Q9BZJ7 368 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 TBC1D7Q9P0N9 293 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 MAPK8IP1Q9UQF2 711 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 PCDHB13Q9Y5F0 798 aa18.49■□□□□ 0.55
VIM-205ENST00000485947 TDRD15B5MCY1 1934 aaKnown RBP18.49■□□□□ 0.55
VIM-205ENST00000485947 ABLIM1O14639 778 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 TEX28O15482 410 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 GLUD1P00367 558 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 KCNE1P15382 129 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 TAS1R1Q7RTX1 841 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 ZNF720Q7Z2F6 126 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 HAUS6Q7Z4H7 955 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 GPR149Q86SP6 731 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 PLCD3Q8N3E9 789 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 NOC3LQ8WTT2 800 aaKnown RBP18.48■□□□□ 0.55
VIM-205ENST00000485947 SCFD1Q8WVM8 642 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 PIK3R5Q8WYR1 880 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 HVCN1Q96D96 273 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 RPGRIP1Q96KN7 1286 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 TSG101Q99816 390 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 TTPALQ9BTX7 342 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 NFE2L3Q9Y4A8 694 aa18.48■□□□□ 0.55
VIM-205ENST00000485947 SMIM28A0A1B0GU29 152 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 K7ENM7 598 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 C2CD2LO14523 706 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 CLDN3O15551 220 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 PPP1R37O75864 691 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 RPL9P32969 192 aaKnown RBP18.47■□□□□ 0.55
VIM-205ENST00000485947 STX17P56962 302 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 MCL1Q07820 350 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 NOLC1Q14978 699 aaKnown RBP eCLIP18.47■□□□□ 0.55
VIM-205ENST00000485947 TPD52L1Q16890 204 aaPredicted RBP18.47■□□□□ 0.55
VIM-205ENST00000485947 RARS2Q5T160 578 aaKnown RBP18.47■□□□□ 0.55
VIM-205ENST00000485947 TTI2Q6NXR4 508 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.47■□□□□ 0.55
VIM-205ENST00000485947 RTL10Q7L3V2 364 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 EDAQ92838 391 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 MED15Q96RN5 788 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 STRA6Q9BX79 667 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 FGFBP2Q9BYJ0 223 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 PLEKHA5Q9HAU0 1116 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 CNTN3Q9P232 1028 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 USP20Q9Y2K6 914 aa18.47■□□□□ 0.55
VIM-205ENST00000485947 CASTOR2A6NHX0 329 aa18.46■□□□□ 0.55
VIM-205ENST00000485947 SPDYE4A6NLX3 237 aa18.46■□□□□ 0.55
VIM-205ENST00000485947 PIGRP01833 764 aa18.46■□□□□ 0.55
VIM-205ENST00000485947 MYBP10242 640 aa18.46■□□□□ 0.55
VIM-205ENST00000485947 NMT1P30419 496 aaKnown RBP18.46■□□□□ 0.55
VIM-205ENST00000485947 CASP5P51878 434 aa18.46■□□□□ 0.55
VIM-205ENST00000485947 UPP1Q16831 310 aa18.46■□□□□ 0.55
VIM-205ENST00000485947 KNOP1Q1ED39 458 aaKnown RBP18.46■□□□□ 0.55
VIM-205ENST00000485947 ZDHHC14Q8IZN3 488 aa18.46■□□□□ 0.55
VIM-205ENST00000485947 GLIS3Q8NEA6 775 aa18.46■□□□□ 0.55
VIM-205ENST00000485947 RIN2Q8WYP3 895 aaPredicted RBP18.46■□□□□ 0.55
VIM-205ENST00000485947 ANP32BQ92688 251 aaKnown RBP18.46■□□□□ 0.55
VIM-205ENST00000485947 ZDHHC7Q9NXF8 308 aa18.46■□□□□ 0.55
VIM-205ENST00000485947 B3GAT3O94766 335 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 KIF4AO95239 1232 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 FGFR1OPO95684 399 aaKnown RBP18.45■□□□□ 0.54
VIM-205ENST00000485947 CLTAP09496 248 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 GTF2BQ00403 316 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 EDRF1Q3B7T1 1238 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 ZCWPW2Q504Y3 356 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 FAM171A1Q5VUB5 890 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 LILRA6Q6PI73 481 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 SARM1Q6SZW1 724 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 BMP8AQ7Z5Y6 402 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 PAAF1Q9BRP4 392 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 KCTD10Q9H3F6 313 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 POMKQ9H5K3 350 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 THAP9Q9H5L6 903 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 TMEM206Q9H813 350 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 MAN1C1Q9NR34 630 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 MUTYHQ9UIF7 546 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 TBX20Q9UMR3 447 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 TRAF3IP3Q9Y228 551 aa18.45■□□□□ 0.54
VIM-205ENST00000485947 TRIM49BA6NDI0 452 aa18.44■□□□□ 0.54
VIM-205ENST00000485947 F8W810 466 aa18.44■□□□□ 0.54
VIM-205ENST00000485947 PDXKO00764 312 aa18.44■□□□□ 0.54
VIM-205ENST00000485947 CALUO43852 315 aaPredicted RBP18.44■□□□□ 0.54
VIM-205ENST00000485947 PRPF6O94906 941 aaKnown RBP18.44■□□□□ 0.54
VIM-205ENST00000485947 ZNF18P17022 549 aa18.44■□□□□ 0.54
VIM-205ENST00000485947 FGFR3P22607 806 aa18.44■□□□□ 0.54
VIM-205ENST00000485947 PMS1P54277 932 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms