RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 USP37Q86T82 979 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 RNF168Q8IYW5 571 aaPredicted RBP25.54■■□□□ 1.68
ABCF3-216ENST00000485921 C1orf127Q8N9H9 656 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 MICAL1Q8TDZ2 1067 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 BORCS6Q96GS4 357 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 TCF25Q9BQ70 676 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 ITGA11Q9UKX5 1188 aa25.54■■□□□ 1.68
ABCF3-216ENST00000485921 TRAPPC3O43617 180 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 LETM1O95202 739 aaPredicted RBP25.53■■□□□ 1.68
ABCF3-216ENST00000485921 ITGB3P05106 788 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 IRS1P35568 1242 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 BRCC3P46736 316 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 ELAVL2Q12926 359 aaKnown RBP25.53■■□□□ 1.68
ABCF3-216ENST00000485921 BFSP1Q12934 665 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 ZNF516Q92618 1163 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 HERC2P3Q9BVR0 1158 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 SRRTQ9BXP5 876 aaKnown RBP25.53■■□□□ 1.68
ABCF3-216ENST00000485921 ZBP1Q9H171 429 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 ENTPD7Q9NQZ7 604 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 TRANK1O15050 2925 aa25.53■■□□□ 1.68
ABCF3-216ENST00000485921 I3L4J1 428 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 FSCN2O14926 492 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 FGFR1OPO95684 399 aaKnown RBP25.52■■□□□ 1.68
ABCF3-216ENST00000485921 KRT19P08727 400 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 CTSAP10619 480 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 POLR2BP30876 1174 aaKnown RBP25.52■■□□□ 1.68
ABCF3-216ENST00000485921 AP3M2P53677 418 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 TYRO3Q06418 890 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 ENPEPQ07075 957 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 BMS1Q14692 1282 aaKnown RBP25.52■■□□□ 1.68
ABCF3-216ENST00000485921 FAM171A1Q5VUB5 890 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 PDE12Q6L8Q7 609 aaKnown RBP25.52■■□□□ 1.68
ABCF3-216ENST00000485921 TRAPPC11Q7Z392 1133 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 NGRNQ9NPE2 291 aaKnown RBP25.52■■□□□ 1.68
ABCF3-216ENST00000485921 AGAP1Q9UPQ3 857 aa25.52■■□□□ 1.68
ABCF3-216ENST00000485921 IKBKBO14920 756 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 CXCL14O95715 111 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 RBP5P82980 135 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 USP41Q3LFD5 358 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 TIGD5Q53EQ6 642 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 C1orf220Q5T0J3 134 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 PLPP4Q5VZY2 271 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 SCARA3Q6AZY7 606 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 CXorf38Q8TB03 319 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 B3GALT6Q96L58 329 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 ARMCX3Q9UH62 379 aaPredicted RBP25.51■■□□□ 1.67
ABCF3-216ENST00000485921 SIX4Q9UIU6 781 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 R3HCC1Q9Y3T6 440 aaKnown RBP25.51■■□□□ 1.67
ABCF3-216ENST00000485921 PCDHGC5Q9Y5F6 944 aa25.51■■□□□ 1.67
ABCF3-216ENST00000485921 TRIM49P0CI25 452 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 TRIM49CP0CI26 452 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 GLUD2P49448 558 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 LILRA4P59901 499 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 MCCD1P59942 119 aaPredicted RBP25.5■■□□□ 1.67
ABCF3-216ENST00000485921 SMC1AQ14683 1233 aaKnown RBP25.5■■□□□ 1.67
ABCF3-216ENST00000485921 TPD52L1Q16890 204 aaPredicted RBP25.5■■□□□ 1.67
ABCF3-216ENST00000485921 CCDC40Q4G0X9 1142 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 KIAA1841Q6NSI8 718 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 FRMD5Q7Z6J6 570 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 AUTS2Q8WXX7 1259 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 SUSD3Q96L08 255 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 METTL14Q9HCE5 456 aaKnown RBP25.5■■□□□ 1.67
ABCF3-216ENST00000485921 CHST7Q9NS84 486 aa25.5■■□□□ 1.67
ABCF3-216ENST00000485921 SPTLC1O15269 473 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 GNA14O95837 355 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 C4BPAP04003 597 aaKnown RBP25.49■■□□□ 1.67
ABCF3-216ENST00000485921 URODP06132 367 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 PAX3P23760 479 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 CA8P35219 290 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 PNPLA4P41247 253 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 TAF6P49848 677 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 C11orf57Q6ZUT1 292 aaPredicted RBP25.49■■□□□ 1.67
ABCF3-216ENST00000485921 CEP57Q86XR8 500 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 MICALL1Q8N3F8 863 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 MRPL43Q8N983 215 aaKnown RBP25.49■■□□□ 1.67
ABCF3-216ENST00000485921 ZNF560Q96MR9 790 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 TTPALQ9BTX7 342 aa25.49■■□□□ 1.67
ABCF3-216ENST00000485921 NSUN3Q9H649 340 aaKnown RBP25.49■■□□□ 1.67
ABCF3-216ENST00000485921 MRPL17Q9NRX2 175 aaKnown RBP25.49■■□□□ 1.67
ABCF3-216ENST00000485921 SYCE3A1L190 88 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 PHACTR2O75167 634 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 FGFR3P22607 806 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 AARSP49588 968 aaKnown RBP eCLIP25.48■■□□□ 1.67
ABCF3-216ENST00000485921 DSG1Q02413 1049 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 PPP3CAQ08209 521 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 BIRC3Q13489 604 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 PTPN14Q15678 1187 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 KIAA0319Q5VV43 1072 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 TDRD10Q5VZ19 366 aaKnown RBP25.48■■□□□ 1.67
ABCF3-216ENST00000485921 DSTYKQ6XUX3 929 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.48■■□□□ 1.67
ABCF3-216ENST00000485921 LRRC52Q8N7C0 313 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 DNAJC25Q9H1X3 360 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 SSX2IPQ9Y2D8 614 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 MYO7AQ13402 2215 aa25.48■■□□□ 1.67
ABCF3-216ENST00000485921 PRRC2BQ5JSZ5 2229 aaKnown RBP25.47■■□□□ 1.67
ABCF3-216ENST00000485921 C2orf71A6NGG8 1288 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 HIDE1A8MVS5 230 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 C2CD2LO14523 706 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 CST3P01034 146 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms